Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lire1P11260 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Lire1P11260 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lire1P11260 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.6□□□□□ -1.35
Lire1P11260 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Lire1P11260 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Lire1P11260 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lire1P11260 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lire1P11260 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lire1P11260 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lire1P11260 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lire1P11260 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lire1P11260 Gm24869-201ENSMUST00000104072 128 ntBASIC6.6□□□□□ -1.35
Lire1P11260 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.6□□□□□ -1.35
Lire1P11260 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lire1P11260 Gm14539-201ENSMUST00000117527 174 ntBASIC6.6□□□□□ -1.35
Lire1P11260 Gm13622-201ENSMUST00000120658 433 ntBASIC6.6□□□□□ -1.35
Lire1P11260 Gm12535-201ENSMUST00000121025 484 ntBASIC6.6□□□□□ -1.35
Lire1P11260 Gm11188-201ENSMUST00000122382 388 ntBASIC6.6□□□□□ -1.35
Lire1P11260 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC6.6□□□□□ -1.35
Lire1P11260 Gm22642-201ENSMUST00000175352 252 ntBASIC6.6□□□□□ -1.35
Lire1P11260 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lire1P11260 Gm27026-201ENSMUST00000183003 892 ntBASIC6.6□□□□□ -1.35
Lire1P11260 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.6□□□□□ -1.35
Lire1P11260 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Lire1P11260 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.6□□□□□ -1.35
Lire1P11260 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC6.6□□□□□ -1.35
Lire1P11260 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC6.6□□□□□ -1.35
Lire1P11260 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC6.6□□□□□ -1.35
Lire1P11260 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lire1P11260 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC6.6□□□□□ -1.35
Lire1P11260 Gm44760-201ENSMUST00000206375 1173 ntBASIC6.6□□□□□ -1.35
Lire1P11260 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.6□□□□□ -1.35
Lire1P11260 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lire1P11260 Gm9604-201ENSMUST00000211175 433 ntBASIC6.6□□□□□ -1.35
Lire1P11260 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC6.6□□□□□ -1.35
Lire1P11260 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC6.6□□□□□ -1.35
Lire1P11260 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.6□□□□□ -1.35
Lire1P11260 CT009550.2-201ENSMUST00000228851 399 ntBASIC6.6□□□□□ -1.35
Lire1P11260 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Lire1P11260 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Lire1P11260 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Lire1P11260 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Lire1P11260 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lire1P11260 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lire1P11260 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC6.6□□□□□ -1.35
Lire1P11260 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lire1P11260 AC091783.1-201ENSMUST00000223614 1613 ntBASIC6.6□□□□□ -1.35
Lire1P11260 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Lire1P11260 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.6□□□□□ -1.35
Lire1P11260 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Lire1P11260 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC6.6□□□□□ -1.35
Lire1P11260 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.6□□□□□ -1.35
Lire1P11260 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
Lire1P11260 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.6□□□□□ -1.35
Lire1P11260 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
Lire1P11260 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lire1P11260 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lire1P11260 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Lire1P11260 Gm44863-201ENSMUST00000207613 1422 ntBASIC6.59□□□□□ -1.35
Lire1P11260 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC6.59□□□□□ -1.35
Lire1P11260 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lire1P11260 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Lire1P11260 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Lire1P11260 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Lire1P11260 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.59□□□□□ -1.35
Lire1P11260 Gm21781-201ENSMUST00000178920 4838 ntBASIC6.59□□□□□ -1.35
Lire1P11260 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.59□□□□□ -1.35
Lire1P11260 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.59□□□□□ -1.35
Lire1P11260 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Lire1P11260 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lire1P11260 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Lire1P11260 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lire1P11260 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lire1P11260 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Lire1P11260 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Lire1P11260 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lire1P11260 Gm15105-201ENSMUST00000117777 204 ntBASIC6.59□□□□□ -1.35
Lire1P11260 Gm15047-201ENSMUST00000118891 454 ntBASIC6.59□□□□□ -1.35
Lire1P11260 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC6.59□□□□□ -1.35
Lire1P11260 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC6.59□□□□□ -1.35
Lire1P11260 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Lire1P11260 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.59□□□□□ -1.35
Lire1P11260 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Lire1P11260 Gm26321-201ENSMUST00000157740 242 ntBASIC6.59□□□□□ -1.35
Lire1P11260 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lire1P11260 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC6.59□□□□□ -1.35
Lire1P11260 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Lire1P11260 Gm24561-201ENSMUST00000175182 95 ntBASIC6.59□□□□□ -1.35
Lire1P11260 Mir8120-201ENSMUST00000185035 139 ntBASIC6.59□□□□□ -1.35
Lire1P11260 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC6.59□□□□□ -1.35
Lire1P11260 Gm29008-201ENSMUST00000189387 298 ntBASIC6.59□□□□□ -1.35
Lire1P11260 Gm29369-201ENSMUST00000190674 615 ntBASIC6.59□□□□□ -1.35
Lire1P11260 Gm43555-201ENSMUST00000196588 310 ntBASIC6.59□□□□□ -1.35
Lire1P11260 Gm44356-201ENSMUST00000196731 111 ntBASIC6.59□□□□□ -1.35
Lire1P11260 Gm43436-201ENSMUST00000199308 147 ntBASIC6.59□□□□□ -1.35
Lire1P11260 Gm2505-201ENSMUST00000200413 825 ntBASIC6.59□□□□□ -1.35
Lire1P11260 Gm8479-201ENSMUST00000203825 718 ntBASIC6.59□□□□□ -1.35
Lire1P11260 Gm4972-201ENSMUST00000211108 1254 ntBASIC6.59□□□□□ -1.35
Lire1P11260 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms