Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm5454-201ENSMUST00000052030 1453 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 AC129308.2-203ENSMUST00000224109 2385 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm9311-201ENSMUST00000118042 1269 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm15311-201ENSMUST00000119682 282 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm4992-201ENSMUST00000120256 768 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm15305-201ENSMUST00000120354 288 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm11553-201ENSMUST00000120682 240 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm14741-201ENSMUST00000120777 1009 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm14531-201ENSMUST00000120845 285 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm12804-201ENSMUST00000121030 999 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm12778-201ENSMUST00000122341 333 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm23756-201ENSMUST00000157582 114 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm23031-201ENSMUST00000157998 119 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm6264-201ENSMUST00000160802 624 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm27152-201ENSMUST00000183828 99 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm29156-201ENSMUST00000187764 499 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm37439-201ENSMUST00000193150 856 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm9367-201ENSMUST00000205703 546 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 AC091237.1-201ENSMUST00000224911 637 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 AC165106.1-201ENSMUST00000227580 408 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gpr87-201ENSMUST00000056898 1080 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 n-R5s95-201ENSMUST00000082684 118 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm10650-202ENSMUST00000196581 1969 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 AC139754.2-201ENSMUST00000218037 1455 ntBASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm45786-201ENSMUST00000213021 2278 ntBASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm37913-201ENSMUST00000192925 2544 ntBASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Snord88a-201ENSMUST00000116723 90 ntBASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm13141-201ENSMUST00000117417 456 ntBASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Apc-ps1-201ENSMUST00000119356 470 ntBASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm5166-201ENSMUST00000121332 573 ntBASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm14613-201ENSMUST00000122239 752 ntBASIC7.17□□□□□ -1.26
Chmp6P0C0A3 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm22642-201ENSMUST00000175352 252 ntBASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm20637-201ENSMUST00000175715 462 ntBASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm10136-201ENSMUST00000183196 435 ntBASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm28846-201ENSMUST00000189161 368 ntBASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Ighv1-29-201ENSMUST00000194116 342 ntBASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm37285-201ENSMUST00000194465 1139 ntBASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm43063-201ENSMUST00000198198 1081 ntBASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm45899-201ENSMUST00000212196 1276 ntBASIC7.17□□□□□ -1.26
Chmp6P0C0A3 AC091783.3-201ENSMUST00000223969 681 ntBASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm37755-201ENSMUST00000195880 2179 ntBASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm8177-201ENSMUST00000181591 1336 ntBASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC7.17□□□□□ -1.26
Chmp6P0C0A3 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms