Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm12327-201ENSMUST00000121729 1168 ntBASIC8.62□□□□□ -1.03
NpcdF8VQB8 Gm25780-201ENSMUST00000122528 253 ntBASIC8.62□□□□□ -1.03
NpcdF8VQB8 Gm16260-201ENSMUST00000155141 304 ntBASIC8.62□□□□□ -1.03
NpcdF8VQB8 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC8.62□□□□□ -1.03
NpcdF8VQB8 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC8.62□□□□□ -1.03
NpcdF8VQB8 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NpcdF8VQB8 Gm26784-201ENSMUST00000181666 410 ntBASIC8.62□□□□□ -1.03
NpcdF8VQB8 Gm27817-201ENSMUST00000184302 233 ntBASIC8.62□□□□□ -1.03
NpcdF8VQB8 Gm29492-201ENSMUST00000187124 457 ntBASIC8.62□□□□□ -1.03
NpcdF8VQB8 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC8.62□□□□□ -1.03
NpcdF8VQB8 Gm17895-201ENSMUST00000194028 874 ntBASIC8.62□□□□□ -1.03
NpcdF8VQB8 Gm17908-201ENSMUST00000205552 1256 ntBASIC8.62□□□□□ -1.03
NpcdF8VQB8 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC8.62□□□□□ -1.03
NpcdF8VQB8 Gm4083-201ENSMUST00000207158 451 ntBASIC8.62□□□□□ -1.03
NpcdF8VQB8 Gm44688-201ENSMUST00000209083 537 ntBASIC8.62□□□□□ -1.03
NpcdF8VQB8 Gm2221-201ENSMUST00000209342 418 ntBASIC8.62□□□□□ -1.03
NpcdF8VQB8 Gm19201-201ENSMUST00000210127 778 ntBASIC8.62□□□□□ -1.03
NpcdF8VQB8 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC8.62□□□□□ -1.03
NpcdF8VQB8 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC8.62□□□□□ -1.03
NpcdF8VQB8 Vmn1r41-205ENSMUST00000227630 827 ntBASIC8.62□□□□□ -1.03
NpcdF8VQB8 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
NpcdF8VQB8 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NpcdF8VQB8 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
NpcdF8VQB8 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NpcdF8VQB8 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NpcdF8VQB8 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NpcdF8VQB8 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
NpcdF8VQB8 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
NpcdF8VQB8 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
NpcdF8VQB8 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NpcdF8VQB8 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NpcdF8VQB8 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NpcdF8VQB8 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NpcdF8VQB8 Mbnl2-203ENSMUST00000226800 3328 ntBASIC8.62□□□□□ -1.03
NpcdF8VQB8 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
NpcdF8VQB8 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC8.62□□□□□ -1.03
NpcdF8VQB8 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
NpcdF8VQB8 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NpcdF8VQB8 CT010514.1-201ENSMUST00000214088 2969 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm45174-201ENSMUST00000208884 3065 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
NpcdF8VQB8 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm3883-201ENSMUST00000098119 3229 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm24272-201ENSMUST00000102329 98 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm22275-201ENSMUST00000122470 310 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm26487-201ENSMUST00000158022 94 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm23225-201ENSMUST00000158121 114 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm3076-201ENSMUST00000161613 451 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Mir669a-7-201ENSMUST00000180364 87 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm27998-201ENSMUST00000184902 361 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm5260-201ENSMUST00000186157 949 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm28934-201ENSMUST00000186491 346 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm37908-201ENSMUST00000195828 470 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Mir669a-6-201ENSMUST00000196127 87 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Mir669a-12-201ENSMUST00000197274 87 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Mir669a-5-201ENSMUST00000197439 87 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Mir669a-10-201ENSMUST00000197745 87 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Mir669a-11-201ENSMUST00000197952 87 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Mir669a-4-201ENSMUST00000198665 87 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Mir669a-9-201ENSMUST00000200087 87 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Mir669a-8-201ENSMUST00000200268 87 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm45247-201ENSMUST00000210757 309 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm45734-201ENSMUST00000211916 411 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NpcdF8VQB8 AC124778.1-201ENSMUST00000216013 162 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 AC122901.2-201ENSMUST00000216926 285 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm6575-201ENSMUST00000222946 697 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
NpcdF8VQB8 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NpcdF8VQB8 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm28651-202ENSMUST00000227968 2693 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC8.61□□□□□ -1.03
NpcdF8VQB8 AC151984.1-201ENSMUST00000218261 2976 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm37303-201ENSMUST00000194202 1559 ntBASIC8.61□□□□□ -1.03
NpcdF8VQB8 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
NpcdF8VQB8 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms