Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Nfia-203ENSMUST00000092532 9382 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Gm23030-201ENSMUST00000158004 273 ntBASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Gm27861-201ENSMUST00000183920 214 ntBASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Gm7891-201ENSMUST00000190284 843 ntBASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Gm28620-201ENSMUST00000190463 439 ntBASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Gm37005-201ENSMUST00000193281 1164 ntBASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Igkv4-73-201ENSMUST00000199760 358 ntBASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Gm44212-201ENSMUST00000205016 897 ntBASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 AC131997.2-201ENSMUST00000227452 362 ntBASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 AC160637.1-201ENSMUST00000214037 3887 ntBASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Arpp19-205ENSMUST00000168166 3944 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Sypl-202ENSMUST00000076698 4999 ntAPPRIS P4 TSL 1 (best) BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Gm15095-201ENSMUST00000118996 1430 ntBASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Gm37077-201ENSMUST00000195723 3691 ntBASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Gm42981-201ENSMUST00000200184 3252 ntBASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Mmp27-202ENSMUST00000151853 1673 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Tmem268-202ENSMUST00000080336 3630 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Rpgr-204ENSMUST00000115532 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Hmcn1D3YXG0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 4930543N07Rik-201ENSMUST00000209357 1364 ntTSL 5 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gm42486-201ENSMUST00000200369 3486 ntBASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gm37767-201ENSMUST00000193239 1834 ntBASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Grm8-201ENSMUST00000090512 2830 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gm23653-201ENSMUST00000116751 97 ntBASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gm14610-201ENSMUST00000118358 966 ntBASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gm14938-201ENSMUST00000119482 943 ntBASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gm14841-201ENSMUST00000121067 758 ntBASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gm22726-201ENSMUST00000158089 179 ntBASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gm8192-201ENSMUST00000182196 958 ntBASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Ly6a-205ENSMUST00000189068 878 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Mir6994-201ENSMUST00000198985 73 ntBASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 n-R5s173-201ENSMUST00000082620 119 ntBASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Snora44-201ENSMUST00000082670 129 ntBASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Mir106b-201ENSMUST00000083580 82 ntBASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Sp100-202ENSMUST00000066427 2708 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gm43864-201ENSMUST00000204452 4028 ntBASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 1300002E11Rik-201ENSMUST00000180830 3557 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gm13100-201ENSMUST00000117157 1439 ntBASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Wnk1-218ENSMUST00000161512 1426 ntBASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gm11298-201ENSMUST00000120503 1799 ntBASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Scn3b-206ENSMUST00000176185 4090 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Hmcn1D3YXG0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms