Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm21301-201ENSMUST00000189476 699 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm29214-201ENSMUST00000190216 570 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm38200-201ENSMUST00000192083 2111 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm2975-201ENSMUST00000209710 820 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm17950-201ENSMUST00000214617 646 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm18914-201ENSMUST00000214625 616 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 n-R5s169-201ENSMUST00000083110 120 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm11342-203ENSMUST00000224879 1324 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm25760-201ENSMUST00000103989 132 ntBASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm13207-201ENSMUST00000119862 773 ntBASIC6.44□□□□□ -1.38
Lima1Q9ERG0 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm15242-201ENSMUST00000122459 283 ntBASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm24442-201ENSMUST00000157238 327 ntBASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm16138-201ENSMUST00000159341 821 ntBASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm22702-201ENSMUST00000175372 69 ntBASIC6.44□□□□□ -1.38
Lima1Q9ERG0 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm29650-201ENSMUST00000188485 742 ntBASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm19185-201ENSMUST00000196365 643 ntBASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm17918-201ENSMUST00000205315 574 ntBASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm38430-201ENSMUST00000209888 1240 ntBASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 AC154849.2-201ENSMUST00000223781 974 ntBASIC6.44□□□□□ -1.38
Lima1Q9ERG0 AC154515.3-201ENSMUST00000225081 1159 ntBASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.44□□□□□ -1.38
Lima1Q9ERG0 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Lima1Q9ERG0 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms