Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Gm25724-201ENSMUST00000104531 117 ntBASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Gm13930-201ENSMUST00000118569 368 ntBASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Gm8312-201ENSMUST00000119380 618 ntBASIC6.24□□□□□ -1.41
Cdc40Q9DC48 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Gm23891-201ENSMUST00000158114 138 ntBASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Gm9167-201ENSMUST00000182469 962 ntBASIC6.24□□□□□ -1.41
Cdc40Q9DC48 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Ighv1-83-201ENSMUST00000199643 351 ntBASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Gm7452-201ENSMUST00000200764 788 ntBASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Gm18955-201ENSMUST00000223173 649 ntBASIC6.24□□□□□ -1.41
Cdc40Q9DC48 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.24□□□□□ -1.41
Cdc40Q9DC48 A1cf-203ENSMUST00000224400 1204 ntBASIC6.24□□□□□ -1.41
Cdc40Q9DC48 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.24□□□□□ -1.41
Cdc40Q9DC48 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Gm43789-201ENSMUST00000199275 2472 ntBASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Gm14070-201ENSMUST00000120773 428 ntBASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Gm12518-201ENSMUST00000122075 779 ntBASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Gm15501-202ENSMUST00000140687 625 ntBASIC6.23□□□□□ -1.41
Cdc40Q9DC48 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Gm17895-201ENSMUST00000194028 874 ntBASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Gm6077-201ENSMUST00000196008 499 ntBASIC6.23□□□□□ -1.41
Cdc40Q9DC48 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.23□□□□□ -1.41
Cdc40Q9DC48 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdc40Q9DC48 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms