Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm42673-201ENSMUST00000202676 337 ntBASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Gm2221-201ENSMUST00000209342 418 ntBASIC7.51□□□□□ -1.21
Smc1aQ9CU62 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Gm2840-201ENSMUST00000048361 411 ntBASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Gm24924-201ENSMUST00000084007 164 ntBASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm9874-202ENSMUST00000194957 1464 ntBASIC7.5□□□□□ -1.21
Smc1aQ9CU62 AC130831.1-201ENSMUST00000224546 1474 ntBASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm14976-201ENSMUST00000117055 1394 ntBASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm45174-201ENSMUST00000208884 3065 ntBASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm7494-201ENSMUST00000121248 441 ntBASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm9285-201ENSMUST00000177691 697 ntBASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm7426-201ENSMUST00000179046 404 ntBASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm8357-201ENSMUST00000181115 1011 ntBASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm38022-201ENSMUST00000191762 403 ntBASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm20128-201ENSMUST00000196189 417 ntBASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm43377-201ENSMUST00000201640 455 ntBASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm46231-201ENSMUST00000220152 314 ntBASIC7.5□□□□□ -1.21
Smc1aQ9CU62 AC174082.2-201ENSMUST00000222094 543 ntBASIC7.5□□□□□ -1.21
Smc1aQ9CU62 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm4808-201ENSMUST00000222283 1203 ntBASIC7.5□□□□□ -1.21
Smc1aQ9CU62 AC154323.2-201ENSMUST00000226557 1151 ntBASIC7.5□□□□□ -1.21
Smc1aQ9CU62 AC156574.1-201ENSMUST00000227084 452 ntBASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 AC122263.1-201ENSMUST00000228636 2805 ntBASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Smc1aQ9CU62 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Gm22284-201ENSMUST00000104132 132 ntBASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Gm23768-201ENSMUST00000104440 131 ntBASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Gm15310-201ENSMUST00000117891 372 ntBASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Gm12369-201ENSMUST00000121343 942 ntBASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Gm9359-201ENSMUST00000163721 1221 ntBASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Gm18808-201ENSMUST00000173316 462 ntBASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Mir3471-2-201ENSMUST00000174896 102 ntBASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Gm24756-201ENSMUST00000177002 96 ntBASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Gm37669-201ENSMUST00000192184 820 ntBASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Gm43656-201ENSMUST00000197882 434 ntBASIC7.49□□□□□ -1.21
Smc1aQ9CU62 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Gm34424-201ENSMUST00000213400 782 ntBASIC7.49□□□□□ -1.21
Smc1aQ9CU62 AL603745.1-201ENSMUST00000215473 532 ntBASIC7.49□□□□□ -1.21
Smc1aQ9CU62 AC165349.1-201ENSMUST00000217896 424 ntBASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Smc1aQ9CU62 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC7.49□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms