Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Use1Q9CQ56 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 AC107452.3-201ENSMUST00000228807 1308 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Use1Q9CQ56 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm38200-201ENSMUST00000192083 2111 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Use1Q9CQ56 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm25760-201ENSMUST00000103989 132 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm23748-201ENSMUST00000104227 131 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm12072-201ENSMUST00000118293 715 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm14870-201ENSMUST00000118414 156 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm15149-201ENSMUST00000119370 360 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm11263-201ENSMUST00000121853 749 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm26023-201ENSMUST00000122722 313 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm16357-201ENSMUST00000144091 474 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm20615-201ENSMUST00000177503 705 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm23018-201ENSMUST00000177928 109 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm27014-201ENSMUST00000182658 937 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm18849-201ENSMUST00000189861 560 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm9357-201ENSMUST00000207138 805 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC6.22□□□□□ -1.41
Use1Q9CQ56 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm17849-201ENSMUST00000219788 853 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 AC116502.1-201ENSMUST00000220989 291 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Use1Q9CQ56 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC6.22□□□□□ -1.41
Use1Q9CQ56 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Use1Q9CQ56 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Use1Q9CQ56 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.22□□□□□ -1.41
Use1Q9CQ56 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Use1Q9CQ56 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Use1Q9CQ56 Gm45793-201ENSMUST00000207900 1342 ntBASIC6.22□□□□□ -1.41
Use1Q9CQ56 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Use1Q9CQ56 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Use1Q9CQ56 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Use1Q9CQ56 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.21□□□□□ -1.41
Use1Q9CQ56 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Use1Q9CQ56 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Use1Q9CQ56 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Use1Q9CQ56 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Use1Q9CQ56 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Use1Q9CQ56 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.21□□□□□ -1.41
Use1Q9CQ56 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Use1Q9CQ56 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Use1Q9CQ56 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Use1Q9CQ56 Gm25631-201ENSMUST00000104390 130 ntBASIC6.21□□□□□ -1.42
Use1Q9CQ56 Gm12306-201ENSMUST00000117256 171 ntBASIC6.21□□□□□ -1.42
Use1Q9CQ56 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.21□□□□□ -1.42
Use1Q9CQ56 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Use1Q9CQ56 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Use1Q9CQ56 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Use1Q9CQ56 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC6.21□□□□□ -1.42
Use1Q9CQ56 Gm35323-201ENSMUST00000191836 499 ntBASIC6.21□□□□□ -1.42
Use1Q9CQ56 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC6.21□□□□□ -1.42
Use1Q9CQ56 Gm44979-201ENSMUST00000206218 287 ntBASIC6.21□□□□□ -1.42
Use1Q9CQ56 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Use1Q9CQ56 Gm7943-201ENSMUST00000212078 1034 ntBASIC6.21□□□□□ -1.42
Use1Q9CQ56 Gm7780-201ENSMUST00000214787 406 ntBASIC6.21□□□□□ -1.42
Use1Q9CQ56 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.21□□□□□ -1.42
Use1Q9CQ56 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Use1Q9CQ56 Gm5436-201ENSMUST00000058103 643 ntBASIC6.21□□□□□ -1.42
Use1Q9CQ56 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Use1Q9CQ56 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Use1Q9CQ56 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Use1Q9CQ56 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Use1Q9CQ56 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms