Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm6181-201ENSMUST00000117187 264 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm14836-201ENSMUST00000118567 471 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm8993-201ENSMUST00000182182 983 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm5839-201ENSMUST00000182835 1007 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm2617-201ENSMUST00000185690 1066 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm28416-201ENSMUST00000188334 292 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm42502-201ENSMUST00000198550 1089 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm43431-201ENSMUST00000198577 340 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm43810-201ENSMUST00000201018 232 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm43004-201ENSMUST00000201872 703 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm18452-201ENSMUST00000202968 1111 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm19073-201ENSMUST00000219978 555 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Zfp874a-208ENSMUST00000225479 1092 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm9585-201ENSMUST00000219681 1404 ntBASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Trim11Q99PQ2 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 AC139350.2-201ENSMUST00000226508 2331 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Gm43343-201ENSMUST00000202454 1926 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Gm8276-201ENSMUST00000192231 1812 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Gm14932-201ENSMUST00000117112 453 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Gm14795-201ENSMUST00000118461 471 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Gm15665-201ENSMUST00000119116 847 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Gm11357-201ENSMUST00000119758 954 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Defa-ps13-201ENSMUST00000120695 204 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Gm11688-201ENSMUST00000122145 308 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Gm21182-201ENSMUST00000178899 794 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Gm38395-201ENSMUST00000199904 830 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Gm30196-201ENSMUST00000208957 160 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Gm46103-201ENSMUST00000217614 341 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 AC120002.1-201ENSMUST00000218456 331 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC8.25□□□□□ -1.09
Trim11Q99PQ2 AC158531.2-201ENSMUST00000224264 473 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 AC122533.1-201ENSMUST00000225177 767 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 CT030254.1-201ENSMUST00000225450 1078 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Diaph3-206ENSMUST00000226745 713 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 AC158981.1-201ENSMUST00000226943 1205 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 AC098742.1-201ENSMUST00000227945 373 ntBASIC8.25□□□□□ -1.09
Trim11Q99PQ2 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms