Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm24173-201ENSMUST00000104130 128 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm12635-201ENSMUST00000117285 752 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm13260-201ENSMUST00000117797 1264 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm12219-201ENSMUST00000119198 443 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm6877-201ENSMUST00000119347 1101 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm13221-201ENSMUST00000121712 430 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm14048-201ENSMUST00000121864 1268 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm6081-201ENSMUST00000134472 489 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm9658-201ENSMUST00000182757 1012 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Mir6922-201ENSMUST00000185099 66 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm37103-201ENSMUST00000191830 115 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm8860-201ENSMUST00000193160 445 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm38135-201ENSMUST00000195068 502 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm8290-201ENSMUST00000218202 477 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm17849-201ENSMUST00000219788 853 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm18601-201ENSMUST00000220831 634 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 AV026068-218ENSMUST00000223980 575 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 AC116591.1-201ENSMUST00000227919 351 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Snora9-201ENSMUST00000082579 133 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Mir296-201ENSMUST00000083587 79 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm37772-201ENSMUST00000191635 1394 ntBASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nup35Q8R4R6 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm26645-201ENSMUST00000181076 1316 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm11590-201ENSMUST00000118999 1455 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Mir503-201ENSMUST00000102168 71 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm12937-201ENSMUST00000118333 448 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm11903-201ENSMUST00000118958 727 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm13900-201ENSMUST00000119402 498 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm11259-201ENSMUST00000120554 715 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm23079-201ENSMUST00000157847 117 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm26587-201ENSMUST00000180795 989 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm37685-201ENSMUST00000193507 2177 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm20926-201ENSMUST00000194457 696 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm8539-201ENSMUST00000199822 501 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm42799-201ENSMUST00000201331 328 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm43377-201ENSMUST00000201640 455 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm18838-201ENSMUST00000204855 886 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 CT009546.3-201ENSMUST00000220914 208 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gcnt2-204ENSMUST00000223570 335 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 AL669819.1-201ENSMUST00000225143 330 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Diaph3-204ENSMUST00000226254 682 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Mir196a-1-201ENSMUST00000083612 102 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Gm18796-201ENSMUST00000190440 1767 ntBASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Nup35Q8R4R6 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Nup35Q8R4R6 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms