Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Brf1Q8CFK2 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 AC131747.2-201ENSMUST00000226121 1895 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm14513-201ENSMUST00000117403 123 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Apc-ps1-201ENSMUST00000119356 470 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm4997-201ENSMUST00000154056 360 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm22820-201ENSMUST00000157205 329 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm23968-201ENSMUST00000175047 125 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm21839-201ENSMUST00000179536 378 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm19791-201ENSMUST00000180398 859 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm3650-201ENSMUST00000180600 747 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm28620-201ENSMUST00000190463 439 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm28877-201ENSMUST00000191349 604 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm37631-201ENSMUST00000192275 364 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm43383-201ENSMUST00000195981 469 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm20128-201ENSMUST00000196189 417 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm42443-201ENSMUST00000198084 1155 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm18660-201ENSMUST00000199542 629 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 AC122924.1-201ENSMUST00000222044 163 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 AC123656.1-201ENSMUST00000227121 581 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 AC131029.2-203ENSMUST00000228116 1244 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Gm17137-201ENSMUST00000164106 4371 ntBASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Brf1Q8CFK2 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC8□□□□□ -1.13
Brf1Q8CFK2 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC8□□□□□ -1.13
Brf1Q8CFK2 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Brf1Q8CFK2 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Brf1Q8CFK2 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC8□□□□□ -1.13
Brf1Q8CFK2 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Brf1Q8CFK2 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Brf1Q8CFK2 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Brf1Q8CFK2 Gm45885-202ENSMUST00000211520 1383 ntBASIC8□□□□□ -1.13
Brf1Q8CFK2 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Brf1Q8CFK2 AC152922.2-201ENSMUST00000213353 3879 ntBASIC8□□□□□ -1.13
Brf1Q8CFK2 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC8□□□□□ -1.13
Brf1Q8CFK2 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC8□□□□□ -1.13
Brf1Q8CFK2 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Brf1Q8CFK2 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC8□□□□□ -1.13
Brf1Q8CFK2 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Brf1Q8CFK2 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Brf1Q8CFK2 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC8□□□□□ -1.13
Brf1Q8CFK2 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
Brf1Q8CFK2 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
Brf1Q8CFK2 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Brf1Q8CFK2 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Brf1Q8CFK2 Gm4911-201ENSMUST00000119388 945 ntBASIC8□□□□□ -1.13
Brf1Q8CFK2 Gm4992-201ENSMUST00000120256 768 ntBASIC8□□□□□ -1.13
Brf1Q8CFK2 Gm3810-201ENSMUST00000122413 476 ntBASIC8□□□□□ -1.13
Brf1Q8CFK2 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC8□□□□□ -1.13
Brf1Q8CFK2 Gm6542-201ENSMUST00000153606 772 ntBASIC8□□□□□ -1.13
Brf1Q8CFK2 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Brf1Q8CFK2 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC8□□□□□ -1.13
Brf1Q8CFK2 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Brf1Q8CFK2 Gm27186-201ENSMUST00000184223 307 ntBASIC8□□□□□ -1.13
Brf1Q8CFK2 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms