Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm14886-201ENSMUST00000117208 2629 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm22470-201ENSMUST00000104117 130 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm14466-201ENSMUST00000119028 451 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm12447-201ENSMUST00000119110 470 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm12123-201ENSMUST00000120348 472 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm11925-201ENSMUST00000121375 535 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm26023-201ENSMUST00000122722 313 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm24782-201ENSMUST00000157641 132 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm25574-201ENSMUST00000175245 249 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm21301-201ENSMUST00000189476 699 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm37383-201ENSMUST00000191750 745 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm43013-201ENSMUST00000198216 247 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm45156-201ENSMUST00000207255 439 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm18060-201ENSMUST00000207407 564 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm2221-201ENSMUST00000209342 418 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 AC157571.1-201ENSMUST00000222014 520 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 AC165154.2-201ENSMUST00000227310 336 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm24046-201ENSMUST00000083111 165 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Ccdc28bQ8CEG5 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm45179-201ENSMUST00000208452 4337 ntBASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm12344-201ENSMUST00000117087 329 ntBASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm13742-201ENSMUST00000118805 457 ntBASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm14613-201ENSMUST00000122239 752 ntBASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm16284-201ENSMUST00000140995 400 ntBASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm20430-201ENSMUST00000172474 207 ntBASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Mir6239-201ENSMUST00000183564 105 ntBASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm27970-201ENSMUST00000184854 407 ntBASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm29175-201ENSMUST00000189500 402 ntBASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm37506-201ENSMUST00000192008 143 ntBASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm43689-201ENSMUST00000195951 427 ntBASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6.5□□□□□ -1.37
Ccdc28bQ8CEG5 Gm44044-201ENSMUST00000205178 1089 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms