Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Nup88Q8CEC0 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
Nup88Q8CEC0 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Nup88Q8CEC0 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Nup88Q8CEC0 Gm28958-201ENSMUST00000185864 703 ntBASIC7.84□□□□□ -1.15
Nup88Q8CEC0 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Nup88Q8CEC0 Gm44705-201ENSMUST00000206719 339 ntBASIC7.84□□□□□ -1.15
Nup88Q8CEC0 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC7.84□□□□□ -1.15
Nup88Q8CEC0 Gm3678-201ENSMUST00000218888 492 ntBASIC7.84□□□□□ -1.15
Nup88Q8CEC0 CT009495.1-201ENSMUST00000224221 862 ntBASIC7.84□□□□□ -1.15
Nup88Q8CEC0 AC116596.2-203ENSMUST00000227345 731 ntBASIC7.84□□□□□ -1.15
Nup88Q8CEC0 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Nup88Q8CEC0 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
Nup88Q8CEC0 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Nup88Q8CEC0 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Nup88Q8CEC0 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Nup88Q8CEC0 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Nup88Q8CEC0 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Nup88Q8CEC0 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Nup88Q8CEC0 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Nup88Q8CEC0 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Nup88Q8CEC0 AC124680.1-201ENSMUST00000223923 1585 ntBASIC7.84□□□□□ -1.15
Nup88Q8CEC0 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.16
Nup88Q8CEC0 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
Nup88Q8CEC0 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Gm18632-201ENSMUST00000222597 2087 ntBASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Gm26144-201ENSMUST00000104475 132 ntBASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Gm22223-201ENSMUST00000157360 125 ntBASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Gm38068-201ENSMUST00000192546 540 ntBASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Ighv1-83-201ENSMUST00000199643 351 ntBASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Gm18789-201ENSMUST00000216115 550 ntBASIC7.83□□□□□ -1.16
Nup88Q8CEC0 AC073947.1-201ENSMUST00000216991 649 ntBASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Olfr923-204ENSMUST00000219798 1068 ntBASIC7.83□□□□□ -1.16
Nup88Q8CEC0 AC139568.1-201ENSMUST00000222878 486 ntBASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Gm45516-201ENSMUST00000211588 4182 ntBASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Nup88Q8CEC0 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 AC132465.1-201ENSMUST00000219938 1307 ntBASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 CT009757.4-201ENSMUST00000221520 2541 ntBASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Mir708-201ENSMUST00000102189 109 ntBASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Gm7494-201ENSMUST00000121248 441 ntBASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Mir1900-201ENSMUST00000122714 78 ntBASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Gm25722-201ENSMUST00000157498 279 ntBASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Gm5871-201ENSMUST00000176461 718 ntBASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Mir5617-201ENSMUST00000176786 57 ntBASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Mir6337-201ENSMUST00000184194 105 ntBASIC7.82□□□□□ -1.16
Nup88Q8CEC0 AC117240.1-201ENSMUST00000199436 61 ntBASIC7.82□□□□□ -1.16
Nup88Q8CEC0 Gm44823-201ENSMUST00000204775 1107 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms