Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC9.31□□□□□ -0.92
Usp54Q8BL06 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp54Q8BL06 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp54Q8BL06 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Usp54Q8BL06 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Usp54Q8BL06 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC9.31□□□□□ -0.92
Usp54Q8BL06 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC9.31□□□□□ -0.92
Usp54Q8BL06 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp54Q8BL06 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Usp54Q8BL06 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC9.3□□□□□ -0.92
Usp54Q8BL06 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp54Q8BL06 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp54Q8BL06 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC9.3□□□□□ -0.92
Usp54Q8BL06 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp54Q8BL06 Gm15801-201ENSMUST00000120920 522 ntBASIC9.3□□□□□ -0.92
Usp54Q8BL06 Gm26357-201ENSMUST00000158218 115 ntBASIC9.3□□□□□ -0.92
Usp54Q8BL06 Gm8783-201ENSMUST00000159764 522 ntBASIC9.3□□□□□ -0.92
Usp54Q8BL06 Gm7745-201ENSMUST00000182235 973 ntBASIC9.3□□□□□ -0.92
Usp54Q8BL06 Gm27024-201ENSMUST00000182561 755 ntBASIC9.3□□□□□ -0.92
Usp54Q8BL06 Gm8506-201ENSMUST00000186661 829 ntBASIC9.3□□□□□ -0.92
Usp54Q8BL06 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC9.3□□□□□ -0.92
Usp54Q8BL06 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC9.3□□□□□ -0.92
Usp54Q8BL06 Gm10688-201ENSMUST00000214985 520 ntBASIC9.3□□□□□ -0.92
Usp54Q8BL06 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC9.3□□□□□ -0.92
Usp54Q8BL06 AL669819.1-201ENSMUST00000225143 330 ntBASIC9.3□□□□□ -0.92
Usp54Q8BL06 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Usp54Q8BL06 Gm5582-201ENSMUST00000075251 522 ntBASIC9.3□□□□□ -0.92
Usp54Q8BL06 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Usp54Q8BL06 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Usp54Q8BL06 Gm37100-201ENSMUST00000193344 1353 ntBASIC9.3□□□□□ -0.92
Usp54Q8BL06 Wnk1-218ENSMUST00000161512 1426 ntBASIC9.3□□□□□ -0.92
Usp54Q8BL06 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp54Q8BL06 Gm18878-201ENSMUST00000223071 1443 ntBASIC9.3□□□□□ -0.92
Usp54Q8BL06 Olfr15-203ENSMUST00000214590 6240 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Usp54Q8BL06 Gm43618-201ENSMUST00000197392 3451 ntBASIC9.3□□□□□ -0.92
Usp54Q8BL06 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp54Q8BL06 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Usp54Q8BL06 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Usp54Q8BL06 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Usp54Q8BL06 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp54Q8BL06 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Usp54Q8BL06 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp54Q8BL06 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp54Q8BL06 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
Usp54Q8BL06 AC159195.2-201ENSMUST00000223670 3757 ntBASIC9.29□□□□□ -0.92
Usp54Q8BL06 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Gm24719-201ENSMUST00000157520 110 ntBASIC9.29□□□□□ -0.92
Usp54Q8BL06 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Gm17198-201ENSMUST00000171792 1154 ntBASIC9.29□□□□□ -0.92
Usp54Q8BL06 Gm8895-201ENSMUST00000172300 1223 ntBASIC9.29□□□□□ -0.92
Usp54Q8BL06 Gm25065-201ENSMUST00000177914 132 ntBASIC9.29□□□□□ -0.92
Usp54Q8BL06 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Gm25891-201ENSMUST00000180050 132 ntBASIC9.29□□□□□ -0.92
Usp54Q8BL06 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Gm6631-201ENSMUST00000193699 559 ntBASIC9.29□□□□□ -0.92
Usp54Q8BL06 Gm45026-201ENSMUST00000205292 833 ntBASIC9.29□□□□□ -0.92
Usp54Q8BL06 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC9.29□□□□□ -0.92
Usp54Q8BL06 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Gm9292-201ENSMUST00000222008 710 ntBASIC9.29□□□□□ -0.92
Usp54Q8BL06 A1cf-203ENSMUST00000224400 1204 ntBASIC9.29□□□□□ -0.92
Usp54Q8BL06 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Usp54Q8BL06 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usp54Q8BL06 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usp54Q8BL06 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Gm37548-201ENSMUST00000194519 3814 ntBASIC9.29□□□□□ -0.92
Usp54Q8BL06 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Gm15781-201ENSMUST00000120216 323 ntBASIC9.29□□□□□ -0.92
Usp54Q8BL06 Gm7931-201ENSMUST00000121537 271 ntBASIC9.29□□□□□ -0.92
Usp54Q8BL06 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC9.29□□□□□ -0.92
Usp54Q8BL06 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC9.29□□□□□ -0.92
Usp54Q8BL06 Gm4742-201ENSMUST00000200261 771 ntBASIC9.29□□□□□ -0.92
Usp54Q8BL06 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Gm46223-201ENSMUST00000215196 675 ntBASIC9.29□□□□□ -0.92
Usp54Q8BL06 AC157572.4-201ENSMUST00000228203 549 ntBASIC9.29□□□□□ -0.92
Usp54Q8BL06 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Gm23456-201ENSMUST00000083335 137 ntBASIC9.29□□□□□ -0.92
Usp54Q8BL06 Mir298-201ENSMUST00000083476 82 ntBASIC9.29□□□□□ -0.92
Usp54Q8BL06 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Usp54Q8BL06 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Usp54Q8BL06 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Usp54Q8BL06 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Usp54Q8BL06 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Usp54Q8BL06 Gm18310-201ENSMUST00000206494 3912 ntBASIC9.28□□□□□ -0.92
Usp54Q8BL06 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms