Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm2860-201ENSMUST00000199226 707 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm43436-201ENSMUST00000199308 147 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC7□□□□□ -1.29
Ccdc40Q8BI79 AC131795.1-201ENSMUST00000219632 426 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm2139-201ENSMUST00000222569 1075 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 AC108947.1-201ENSMUST00000224274 1000 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 AC133598.2-201ENSMUST00000224302 624 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 CT009711.2-202ENSMUST00000224538 973 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 AC124489.1-201ENSMUST00000225852 526 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 AC154718.1-201ENSMUST00000226676 250 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm6166-201ENSMUST00000098689 409 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm13416-201ENSMUST00000117264 1612 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm38200-201ENSMUST00000192083 2111 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Gm44220-201ENSMUST00000203784 2487 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Gm17184-201ENSMUST00000111864 462 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Gm11462-201ENSMUST00000117749 562 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Gm13260-201ENSMUST00000117797 1264 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Gm16357-201ENSMUST00000144091 474 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Gm25722-201ENSMUST00000157498 279 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Gm23031-201ENSMUST00000157998 119 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Mir8120-201ENSMUST00000185035 139 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Gm27596-201ENSMUST00000185061 83 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Gm29470-201ENSMUST00000188007 696 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Gm38328-201ENSMUST00000195582 317 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Ighv8-15-201ENSMUST00000197770 294 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 AC164550.1-201ENSMUST00000217821 1066 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Gm19056-201ENSMUST00000218220 797 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Gm8275-201ENSMUST00000219732 424 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 AC154849.2-201ENSMUST00000223781 974 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 AC131710.2-201ENSMUST00000226773 683 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Gm44667-201ENSMUST00000207632 3337 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.99□□□□□ -1.29
Ccdc40Q8BI79 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Gm5361-201ENSMUST00000211041 1498 ntBASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Gm14466-201ENSMUST00000119028 451 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms