Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.49□□□□□ -1.37
ClpbQ60649 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
ClpbQ60649 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
ClpbQ60649 Gm25724-201ENSMUST00000104531 117 ntBASIC6.49□□□□□ -1.37
ClpbQ60649 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ClpbQ60649 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.49□□□□□ -1.37
ClpbQ60649 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
ClpbQ60649 Gm15421-202ENSMUST00000118224 399 ntBASIC6.49□□□□□ -1.37
ClpbQ60649 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.49□□□□□ -1.37
ClpbQ60649 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC6.49□□□□□ -1.37
ClpbQ60649 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.49□□□□□ -1.37
ClpbQ60649 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ClpbQ60649 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.49□□□□□ -1.37
ClpbQ60649 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC6.49□□□□□ -1.37
ClpbQ60649 Gm17217-201ENSMUST00000166613 469 ntBASIC6.49□□□□□ -1.37
ClpbQ60649 Gm2619-202ENSMUST00000166777 651 ntBASIC6.49□□□□□ -1.37
ClpbQ60649 Gm27360-201ENSMUST00000183487 80 ntBASIC6.49□□□□□ -1.37
ClpbQ60649 Gm19480-201ENSMUST00000185547 667 ntBASIC6.49□□□□□ -1.37
ClpbQ60649 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC6.49□□□□□ -1.37
ClpbQ60649 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.49□□□□□ -1.37
ClpbQ60649 Ighv6-2-201ENSMUST00000192430 295 ntBASIC6.49□□□□□ -1.37
ClpbQ60649 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
ClpbQ60649 Gm43044-201ENSMUST00000198091 379 ntBASIC6.49□□□□□ -1.37
ClpbQ60649 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
ClpbQ60649 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.49□□□□□ -1.37
ClpbQ60649 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
ClpbQ60649 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC6.49□□□□□ -1.37
ClpbQ60649 Gm3678-201ENSMUST00000218888 492 ntBASIC6.49□□□□□ -1.37
ClpbQ60649 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.49□□□□□ -1.37
ClpbQ60649 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC6.49□□□□□ -1.37
ClpbQ60649 AC163631.1-201ENSMUST00000225041 598 ntBASIC6.49□□□□□ -1.37
ClpbQ60649 AC164436.1-201ENSMUST00000227074 772 ntBASIC6.49□□□□□ -1.37
ClpbQ60649 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
ClpbQ60649 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ClpbQ60649 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ClpbQ60649 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ClpbQ60649 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ClpbQ60649 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
ClpbQ60649 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
ClpbQ60649 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ClpbQ60649 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
ClpbQ60649 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ClpbQ60649 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
ClpbQ60649 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
ClpbQ60649 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
ClpbQ60649 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ClpbQ60649 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ClpbQ60649 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.49□□□□□ -1.37
ClpbQ60649 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ClpbQ60649 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ClpbQ60649 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ClpbQ60649 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.48□□□□□ -1.37
ClpbQ60649 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ClpbQ60649 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.48□□□□□ -1.37
ClpbQ60649 CT030185.1-201ENSMUST00000222940 2289 ntBASIC6.48□□□□□ -1.37
ClpbQ60649 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ClpbQ60649 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ClpbQ60649 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ClpbQ60649 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ClpbQ60649 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ClpbQ60649 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.48□□□□□ -1.37
ClpbQ60649 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
ClpbQ60649 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.48□□□□□ -1.37
ClpbQ60649 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
ClpbQ60649 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
ClpbQ60649 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.48□□□□□ -1.37
ClpbQ60649 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ClpbQ60649 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
ClpbQ60649 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
ClpbQ60649 Gm25760-201ENSMUST00000103989 132 ntBASIC6.48□□□□□ -1.37
ClpbQ60649 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ClpbQ60649 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ClpbQ60649 Gm11796-201ENSMUST00000120208 972 ntBASIC6.48□□□□□ -1.37
ClpbQ60649 Gm14531-201ENSMUST00000120845 285 ntBASIC6.48□□□□□ -1.37
ClpbQ60649 Gm15242-201ENSMUST00000122459 283 ntBASIC6.48□□□□□ -1.37
ClpbQ60649 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.48□□□□□ -1.37
ClpbQ60649 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ClpbQ60649 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.48□□□□□ -1.37
ClpbQ60649 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ClpbQ60649 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.48□□□□□ -1.37
ClpbQ60649 Gm9672-201ENSMUST00000166437 425 ntBASIC6.48□□□□□ -1.37
ClpbQ60649 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
ClpbQ60649 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ClpbQ60649 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
ClpbQ60649 Gm27156-201ENSMUST00000184589 754 ntBASIC6.48□□□□□ -1.37
ClpbQ60649 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC6.48□□□□□ -1.37
ClpbQ60649 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.48□□□□□ -1.37
ClpbQ60649 Gm28665-201ENSMUST00000189269 670 ntBASIC6.48□□□□□ -1.37
ClpbQ60649 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.48□□□□□ -1.37
ClpbQ60649 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ClpbQ60649 Gm37526-201ENSMUST00000194640 619 ntBASIC6.48□□□□□ -1.37
ClpbQ60649 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.48□□□□□ -1.37
ClpbQ60649 Gm6077-201ENSMUST00000196008 499 ntBASIC6.48□□□□□ -1.37
ClpbQ60649 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC6.48□□□□□ -1.37
ClpbQ60649 Gm43382-201ENSMUST00000198954 838 ntBASIC6.48□□□□□ -1.37
ClpbQ60649 Gm21054-201ENSMUST00000203981 380 ntBASIC6.48□□□□□ -1.37
ClpbQ60649 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.48□□□□□ -1.37
ClpbQ60649 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.48□□□□□ -1.37
ClpbQ60649 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ClpbQ60649 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms