Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm14727-201ENSMUST00000118526 525 ntBASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Gm11371-201ENSMUST00000120294 385 ntBASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Gm14721-201ENSMUST00000121381 525 ntBASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Gm14990-201ENSMUST00000122354 445 ntBASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Gm24057-201ENSMUST00000158616 302 ntBASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Gm24369-201ENSMUST00000175387 96 ntBASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Gm19088-201ENSMUST00000198800 566 ntBASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Gm18593-201ENSMUST00000200754 1139 ntBASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 AC167202.1-201ENSMUST00000219027 331 ntBASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Gm5655-201ENSMUST00000221078 901 ntBASIC6.71□□□□□ -1.34
Usp39Q3TIX9 AC156790.1-201ENSMUST00000226572 559 ntBASIC6.71□□□□□ -1.34
Usp39Q3TIX9 AC164597.2-201ENSMUST00000226738 603 ntBASIC6.71□□□□□ -1.34
Usp39Q3TIX9 AC132918.1-201ENSMUST00000227877 925 ntBASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Olfr683-201ENSMUST00000061284 960 ntBASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 CT030185.2-201ENSMUST00000222614 1310 ntBASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm23485-201ENSMUST00000104181 155 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm17170-201ENSMUST00000112785 316 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm13414-201ENSMUST00000117516 727 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm15739-201ENSMUST00000118049 872 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm15484-201ENSMUST00000118871 828 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm12804-201ENSMUST00000121030 999 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm8869-201ENSMUST00000195222 947 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm8182-201ENSMUST00000197863 769 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm17937-201ENSMUST00000197908 742 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm9710-201ENSMUST00000198053 499 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm2691-201ENSMUST00000203205 901 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm44971-201ENSMUST00000206192 337 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm44712-201ENSMUST00000206250 1076 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm20586-201ENSMUST00000210122 547 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm10688-201ENSMUST00000214985 520 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm46231-201ENSMUST00000220152 314 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm19154-201ENSMUST00000223330 940 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 AC161374.1-201ENSMUST00000224191 794 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 CU024892.1-201ENSMUST00000224869 515 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 AC115304.1-202ENSMUST00000226850 837 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.7□□□□□ -1.34
Usp39Q3TIX9 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms