Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col8a1Q00780 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC6.28□□□□□ -1.4
Col8a1Q00780 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
Col8a1Q00780 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 AC134860.3-201ENSMUST00000223564 1300 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm44093-201ENSMUST00000204381 1802 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm43982-201ENSMUST00000204995 1829 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm42981-201ENSMUST00000200184 3252 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm6545-201ENSMUST00000217186 1786 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm26377-201ENSMUST00000102184 108 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm2178-201ENSMUST00000104927 357 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm11474-201ENSMUST00000120814 277 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm14800-201ENSMUST00000122084 1272 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm23441-201ENSMUST00000157268 127 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Mir1983-201ENSMUST00000157523 132 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm3496-201ENSMUST00000188283 745 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm20885-201ENSMUST00000190192 654 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm28070-201ENSMUST00000191502 445 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm7341-201ENSMUST00000192183 926 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm29740-201ENSMUST00000193182 655 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm36866-201ENSMUST00000193343 657 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm36047-201ENSMUST00000193659 657 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm20857-201ENSMUST00000194766 657 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm20858-201ENSMUST00000195459 657 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm45008-201ENSMUST00000206420 493 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm44919-201ENSMUST00000208587 1073 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 AC163296.1-202ENSMUST00000218395 661 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.27□□□□□ -1.41
Col8a1Q00780 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 AC163296.1-201ENSMUST00000220004 1266 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 AC110176.1-201ENSMUST00000226219 504 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 AC121960.3-201ENSMUST00000227077 623 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Cma2-202ENSMUST00000228263 857 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Mir3068-201ENSMUST00000083004 136 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm42678-201ENSMUST00000197163 2221 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms