Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CiitaP79621 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CiitaP79621 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CiitaP79621 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CiitaP79621 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CiitaP79621 Gm22284-201ENSMUST00000104132 132 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CiitaP79621 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC7.28□□□□□ -1.24
CiitaP79621 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CiitaP79621 Gm14733-201ENSMUST00000117680 133 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Gm15621-201ENSMUST00000119162 364 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Gm5793-201ENSMUST00000119393 630 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Gm14038-201ENSMUST00000121500 807 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CiitaP79621 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC7.28□□□□□ -1.24
CiitaP79621 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC7.28□□□□□ -1.24
CiitaP79621 Mir1953-201ENSMUST00000157866 89 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Gm3140-201ENSMUST00000163523 481 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Gm25675-201ENSMUST00000174979 118 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CiitaP79621 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Gm27601-201ENSMUST00000184794 127 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Gm21877-201ENSMUST00000185640 694 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC7.28□□□□□ -1.24
CiitaP79621 Igkv4-83-201ENSMUST00000196933 334 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
CiitaP79621 Olfr923-204ENSMUST00000219798 1068 ntBASIC7.28□□□□□ -1.24
CiitaP79621 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.28□□□□□ -1.24
CiitaP79621 AC174678.3-201ENSMUST00000227568 362 ntBASIC7.28□□□□□ -1.24
CiitaP79621 AC125117.2-201ENSMUST00000228344 1140 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
CiitaP79621 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CiitaP79621 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CiitaP79621 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CiitaP79621 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CiitaP79621 Mir138-1-201ENSMUST00000083480 99 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CiitaP79621 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CiitaP79621 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CiitaP79621 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC7.28□□□□□ -1.24
CiitaP79621 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CiitaP79621 Gm5702-201ENSMUST00000185629 2469 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CiitaP79621 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CiitaP79621 Gm43395-201ENSMUST00000198717 2240 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CiitaP79621 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CiitaP79621 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CiitaP79621 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CiitaP79621 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
CiitaP79621 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC7.27□□□□□ -1.24
CiitaP79621 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
CiitaP79621 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
CiitaP79621 Gm13416-201ENSMUST00000117264 1612 ntBASIC7.27□□□□□ -1.25
CiitaP79621 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CiitaP79621 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
CiitaP79621 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CiitaP79621 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC7.27□□□□□ -1.25
CiitaP79621 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CiitaP79621 Gm13176-201ENSMUST00000117910 477 ntBASIC7.27□□□□□ -1.25
CiitaP79621 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC7.27□□□□□ -1.25
CiitaP79621 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC7.27□□□□□ -1.25
CiitaP79621 Gm7113-201ENSMUST00000120477 958 ntBASIC7.27□□□□□ -1.25
CiitaP79621 Gm22342-201ENSMUST00000122647 298 ntBASIC7.27□□□□□ -1.25
CiitaP79621 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CiitaP79621 Gm26738-201ENSMUST00000181312 601 ntBASIC7.27□□□□□ -1.25
CiitaP79621 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CiitaP79621 Gm21139-201ENSMUST00000186594 877 ntBASIC7.27□□□□□ -1.25
CiitaP79621 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CiitaP79621 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC7.27□□□□□ -1.25
CiitaP79621 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC7.27□□□□□ -1.25
CiitaP79621 Gm18838-201ENSMUST00000204855 886 ntBASIC7.27□□□□□ -1.25
CiitaP79621 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CiitaP79621 Gm7769-201ENSMUST00000212900 933 ntBASIC7.27□□□□□ -1.25
CiitaP79621 Gm4556-201ENSMUST00000217808 355 ntBASIC7.27□□□□□ -1.25
CiitaP79621 AC154904.1-201ENSMUST00000219510 312 ntBASIC7.27□□□□□ -1.25
CiitaP79621 AC124601.1-201ENSMUST00000220531 135 ntBASIC7.27□□□□□ -1.25
CiitaP79621 AC174082.2-201ENSMUST00000222094 543 ntBASIC7.27□□□□□ -1.25
CiitaP79621 Gm18955-201ENSMUST00000223173 649 ntBASIC7.27□□□□□ -1.25
CiitaP79621 AC140288.1-201ENSMUST00000226329 503 ntBASIC7.27□□□□□ -1.25
CiitaP79621 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CiitaP79621 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CiitaP79621 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC7.27□□□□□ -1.25
CiitaP79621 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CiitaP79621 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
CiitaP79621 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CiitaP79621 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
CiitaP79621 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CiitaP79621 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC7.27□□□□□ -1.25
CiitaP79621 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CiitaP79621 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CiitaP79621 Gm43707-201ENSMUST00000196451 3187 ntBASIC7.26□□□□□ -1.25
CiitaP79621 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
CiitaP79621 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
CiitaP79621 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CiitaP79621 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms