Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Grik1-209ENSMUST00000227986 2942 ntBASIC6.39□□□□□ -1.39
Cdx2P43241 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cdx2P43241 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx2P43241 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx2P43241 Gm13702-201ENSMUST00000118542 825 ntBASIC6.39□□□□□ -1.39
Cdx2P43241 Gm7058-201ENSMUST00000119209 902 ntBASIC6.39□□□□□ -1.39
Cdx2P43241 Gm14712-201ENSMUST00000120195 772 ntBASIC6.39□□□□□ -1.39
Cdx2P43241 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Cdx2P43241 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.39□□□□□ -1.39
Cdx2P43241 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.39□□□□□ -1.39
Cdx2P43241 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.39□□□□□ -1.39
Cdx2P43241 Gm37475-201ENSMUST00000193107 1015 ntBASIC6.39□□□□□ -1.39
Cdx2P43241 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC6.39□□□□□ -1.39
Cdx2P43241 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.39□□□□□ -1.39
Cdx2P43241 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.39□□□□□ -1.39
Cdx2P43241 Gm5119-201ENSMUST00000215858 634 ntBASIC6.39□□□□□ -1.39
Cdx2P43241 Gm3266-201ENSMUST00000217832 591 ntBASIC6.39□□□□□ -1.39
Cdx2P43241 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC6.39□□□□□ -1.39
Cdx2P43241 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.39□□□□□ -1.39
Cdx2P43241 CT009515.3-201ENSMUST00000226509 671 ntBASIC6.39□□□□□ -1.39
Cdx2P43241 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx2P43241 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
Cdx2P43241 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cdx2P43241 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx2P43241 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx2P43241 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx2P43241 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx2P43241 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC6.39□□□□□ -1.39
Cdx2P43241 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cdx2P43241 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx2P43241 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cdx2P43241 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.39□□□□□ -1.39
Cdx2P43241 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx2P43241 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Cdx2P43241 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Cdx2P43241 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx2P43241 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
Cdx2P43241 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx2P43241 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx2P43241 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx2P43241 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Cdx2P43241 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Cdx2P43241 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.38□□□□□ -1.39
Cdx2P43241 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC6.38□□□□□ -1.39
Cdx2P43241 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cdx2P43241 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.38□□□□□ -1.39
Cdx2P43241 Gm7189-201ENSMUST00000119811 429 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Gm12262-201ENSMUST00000119915 305 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Gm14054-201ENSMUST00000120744 704 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Gm14695-201ENSMUST00000121721 282 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC6.38□□□□□ -1.39
Cdx2P43241 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.38□□□□□ -1.39
Cdx2P43241 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Gm22530-201ENSMUST00000158820 118 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC6.38□□□□□ -1.39
Cdx2P43241 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Gm25246-201ENSMUST00000175476 69 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.38□□□□□ -1.39
Cdx2P43241 Gm27030-201ENSMUST00000182551 464 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Mir6348-201ENSMUST00000183804 120 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Gm38122-201ENSMUST00000192679 885 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Gm3351-201ENSMUST00000193454 505 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Gm44361-201ENSMUST00000197960 94 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Gm43501-201ENSMUST00000202513 107 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC6.38□□□□□ -1.39
Cdx2P43241 AC140930.1-201ENSMUST00000221889 389 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Cdx2P43241 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Gm10221-201ENSMUST00000088299 309 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Cdx2P43241 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC6.38□□□□□ -1.39
Cdx2P43241 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC6.38□□□□□ -1.39
Cdx2P43241 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cdx2P43241 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cdx2P43241 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
Cdx2P43241 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Cdx2P43241 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Gm14373-201ENSMUST00000122467 2158 ntBASIC6.38□□□□□ -1.39
Cdx2P43241 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdx2P43241 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms