Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cxcl12P40224 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Cxcl12P40224 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.9□□□□□ -1.31
Cxcl12P40224 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Cxcl12P40224 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Cxcl12P40224 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Cxcl12P40224 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Cxcl12P40224 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Cxcl12P40224 Gm17841-201ENSMUST00000210711 2425 ntBASIC6.9□□□□□ -1.31
Cxcl12P40224 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Cxcl12P40224 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Cxcl12P40224 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC6.9□□□□□ -1.31
Cxcl12P40224 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Cxcl12P40224 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Cxcl12P40224 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Cxcl12P40224 Gm37570-201ENSMUST00000195411 3106 ntBASIC6.9□□□□□ -1.31
Cxcl12P40224 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
Cxcl12P40224 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Cxcl12P40224 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC6.89□□□□□ -1.31
Cxcl12P40224 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Cxcl12P40224 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC6.89□□□□□ -1.31
Cxcl12P40224 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Cxcl12P40224 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 Chrna2-201ENSMUST00000022620 3554 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 Gm13428-201ENSMUST00000117540 365 ntBASIC6.89□□□□□ -1.31
Cxcl12P40224 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
Cxcl12P40224 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Cxcl12P40224 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.89□□□□□ -1.31
Cxcl12P40224 Mir6348-201ENSMUST00000183804 120 ntBASIC6.89□□□□□ -1.31
Cxcl12P40224 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC6.89□□□□□ -1.31
Cxcl12P40224 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 Gm28413-201ENSMUST00000189369 291 ntBASIC6.89□□□□□ -1.31
Cxcl12P40224 Gm8419-201ENSMUST00000189886 412 ntBASIC6.89□□□□□ -1.31
Cxcl12P40224 Gm37375-201ENSMUST00000193859 387 ntBASIC6.89□□□□□ -1.31
Cxcl12P40224 Gm37385-201ENSMUST00000195223 387 ntBASIC6.89□□□□□ -1.31
Cxcl12P40224 Gm42619-201ENSMUST00000197564 1136 ntBASIC6.89□□□□□ -1.31
Cxcl12P40224 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Cxcl12P40224 Gm43798-201ENSMUST00000202056 394 ntBASIC6.89□□□□□ -1.31
Cxcl12P40224 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 Gm19033-201ENSMUST00000208516 964 ntBASIC6.89□□□□□ -1.31
Cxcl12P40224 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 Gm45750-201ENSMUST00000211966 354 ntBASIC6.89□□□□□ -1.31
Cxcl12P40224 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC6.89□□□□□ -1.31
Cxcl12P40224 Gm9293-201ENSMUST00000223096 306 ntBASIC6.89□□□□□ -1.31
Cxcl12P40224 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 Gm24454-201ENSMUST00000083349 132 ntBASIC6.89□□□□□ -1.31
Cxcl12P40224 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.89□□□□□ -1.31
Cxcl12P40224 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 AC153959.1-201ENSMUST00000213617 1694 ntBASIC6.89□□□□□ -1.31
Cxcl12P40224 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
Cxcl12P40224 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC6.89□□□□□ -1.31
Cxcl12P40224 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cxcl12P40224 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Cxcl12P40224 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cxcl12P40224 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Cxcl12P40224 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Cxcl12P40224 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cxcl12P40224 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Cxcl12P40224 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
Cxcl12P40224 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cxcl12P40224 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cxcl12P40224 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cxcl12P40224 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cxcl12P40224 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cxcl12P40224 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC6.88□□□□□ -1.31
Cxcl12P40224 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cxcl12P40224 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Cxcl12P40224 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Cxcl12P40224 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
Cxcl12P40224 Gm12901-201ENSMUST00000118690 532 ntBASIC6.88□□□□□ -1.31
Cxcl12P40224 Gm11976-201ENSMUST00000119236 295 ntBASIC6.88□□□□□ -1.31
Cxcl12P40224 Gm16057-201ENSMUST00000120811 759 ntBASIC6.88□□□□□ -1.31
Cxcl12P40224 Gm8317-201ENSMUST00000121261 471 ntBASIC6.88□□□□□ -1.31
Cxcl12P40224 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC6.88□□□□□ -1.31
Cxcl12P40224 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC6.88□□□□□ -1.31
Cxcl12P40224 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.88□□□□□ -1.31
Cxcl12P40224 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC6.88□□□□□ -1.31
Cxcl12P40224 Gm9064-201ENSMUST00000163579 566 ntBASIC6.88□□□□□ -1.31
Cxcl12P40224 Gm26923-201ENSMUST00000182615 996 ntBASIC6.88□□□□□ -1.31
Cxcl12P40224 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Cxcl12P40224 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.88□□□□□ -1.31
Cxcl12P40224 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Cxcl12P40224 Gm9535-201ENSMUST00000218499 768 ntBASIC6.88□□□□□ -1.31
Cxcl12P40224 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.88□□□□□ -1.31
Cxcl12P40224 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms