Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC7.85□□□□□ -1.15
Traf1P39428 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.85□□□□□ -1.15
Traf1P39428 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Traf1P39428 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Traf1P39428 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.84□□□□□ -1.15
Traf1P39428 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Traf1P39428 AC163660.4-201ENSMUST00000224983 2171 ntBASIC7.84□□□□□ -1.15
Traf1P39428 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Traf1P39428 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Traf1P39428 Gm4073-201ENSMUST00000176792 3500 ntBASIC7.84□□□□□ -1.15
Traf1P39428 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC7.84□□□□□ -1.15
Traf1P39428 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Traf1P39428 Mir674-201ENSMUST00000102421 100 ntBASIC7.84□□□□□ -1.15
Traf1P39428 Gm25785-201ENSMUST00000104129 125 ntBASIC7.84□□□□□ -1.15
Traf1P39428 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
Traf1P39428 Gm8722-201ENSMUST00000121466 769 ntBASIC7.84□□□□□ -1.15
Traf1P39428 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC7.84□□□□□ -1.15
Traf1P39428 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC7.84□□□□□ -1.15
Traf1P39428 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC7.84□□□□□ -1.15
Traf1P39428 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Traf1P39428 Gm25722-201ENSMUST00000157498 279 ntBASIC7.84□□□□□ -1.15
Traf1P39428 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Traf1P39428 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
Traf1P39428 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC7.84□□□□□ -1.15
Traf1P39428 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC7.84□□□□□ -1.15
Traf1P39428 Gm29357-201ENSMUST00000186877 698 ntBASIC7.84□□□□□ -1.15
Traf1P39428 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.84□□□□□ -1.15
Traf1P39428 Gm38068-201ENSMUST00000192546 540 ntBASIC7.84□□□□□ -1.15
Traf1P39428 Gm43772-201ENSMUST00000202052 379 ntBASIC7.84□□□□□ -1.15
Traf1P39428 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC7.84□□□□□ -1.15
Traf1P39428 Gm45733-201ENSMUST00000212988 437 ntBASIC7.84□□□□□ -1.15
Traf1P39428 Gm5928-201ENSMUST00000221839 466 ntBASIC7.84□□□□□ -1.15
Traf1P39428 AC156016.2-201ENSMUST00000228200 525 ntBASIC7.84□□□□□ -1.15
Traf1P39428 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Traf1P39428 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Traf1P39428 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Traf1P39428 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Traf1P39428 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
Traf1P39428 Gm7961-201ENSMUST00000201338 1436 ntBASIC7.84□□□□□ -1.15
Traf1P39428 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC7.84□□□□□ -1.15
Traf1P39428 Gm42885-201ENSMUST00000200763 4214 ntBASIC7.84□□□□□ -1.15
Traf1P39428 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Traf1P39428 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC7.84□□□□□ -1.15
Traf1P39428 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Traf1P39428 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Traf1P39428 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC7.84□□□□□ -1.16
Traf1P39428 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.83□□□□□ -1.16
Traf1P39428 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Traf1P39428 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Traf1P39428 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Traf1P39428 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Traf1P39428 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Traf1P39428 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Traf1P39428 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Traf1P39428 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Traf1P39428 AC122346.1-201ENSMUST00000225266 3732 ntBASIC7.83□□□□□ -1.16
Traf1P39428 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Traf1P39428 Sec24c-202ENSMUST00000223751 4196 ntBASIC7.83□□□□□ -1.16
Traf1P39428 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Traf1P39428 Gm22267-201ENSMUST00000104008 131 ntBASIC7.83□□□□□ -1.16
Traf1P39428 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC7.83□□□□□ -1.16
Traf1P39428 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC7.83□□□□□ -1.16
Traf1P39428 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC7.83□□□□□ -1.16
Traf1P39428 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC7.83□□□□□ -1.16
Traf1P39428 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Traf1P39428 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC7.83□□□□□ -1.16
Traf1P39428 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC7.83□□□□□ -1.16
Traf1P39428 Gm3344-201ENSMUST00000169610 603 ntBASIC7.83□□□□□ -1.16
Traf1P39428 Gm5871-201ENSMUST00000176461 718 ntBASIC7.83□□□□□ -1.16
Traf1P39428 Gm28413-201ENSMUST00000189369 291 ntBASIC7.83□□□□□ -1.16
Traf1P39428 Gm2229-201ENSMUST00000193328 710 ntBASIC7.83□□□□□ -1.16
Traf1P39428 Gm43689-201ENSMUST00000195951 427 ntBASIC7.83□□□□□ -1.16
Traf1P39428 Gm6077-201ENSMUST00000196008 499 ntBASIC7.83□□□□□ -1.16
Traf1P39428 AC099760.1-201ENSMUST00000196300 153 ntBASIC7.83□□□□□ -1.16
Traf1P39428 Gm9504-201ENSMUST00000196322 468 ntBASIC7.83□□□□□ -1.16
Traf1P39428 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC7.83□□□□□ -1.16
Traf1P39428 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC7.83□□□□□ -1.16
Traf1P39428 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC7.83□□□□□ -1.16
Traf1P39428 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC7.83□□□□□ -1.16
Traf1P39428 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC7.83□□□□□ -1.16
Traf1P39428 Gm18620-201ENSMUST00000222295 324 ntBASIC7.83□□□□□ -1.16
Traf1P39428 Mir425-201ENSMUST00000083645 85 ntBASIC7.83□□□□□ -1.16
Traf1P39428 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Traf1P39428 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Traf1P39428 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC7.83□□□□□ -1.16
Traf1P39428 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC7.83□□□□□ -1.16
Traf1P39428 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Traf1P39428 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
Traf1P39428 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Traf1P39428 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Traf1P39428 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Traf1P39428 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Traf1P39428 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Traf1P39428 Gm44704-201ENSMUST00000208963 1990 ntBASIC7.82□□□□□ -1.16
Traf1P39428 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 112.5 ms