Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Mmp13P33435 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Mmp13P33435 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
Mmp13P33435 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Mmp13P33435 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.76□□□□□ -1.33
Mmp13P33435 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Mmp13P33435 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Mmp13P33435 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.76□□□□□ -1.33
Mmp13P33435 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.76□□□□□ -1.33
Mmp13P33435 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Mmp13P33435 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Mmp13P33435 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Mmp13P33435 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.75□□□□□ -1.33
Mmp13P33435 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Mmp13P33435 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.75□□□□□ -1.33
Mmp13P33435 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Mmp13P33435 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.75□□□□□ -1.33
Mmp13P33435 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Mmp13P33435 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Mmp13P33435 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Mmp13P33435 Gm26079-201ENSMUST00000104066 133 ntBASIC6.75□□□□□ -1.33
Mmp13P33435 Gm7821-201ENSMUST00000117111 788 ntBASIC6.75□□□□□ -1.33
Mmp13P33435 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.75□□□□□ -1.33
Mmp13P33435 Gm6451-201ENSMUST00000121488 717 ntBASIC6.75□□□□□ -1.33
Mmp13P33435 Gm14613-201ENSMUST00000122239 752 ntBASIC6.75□□□□□ -1.33
Mmp13P33435 Gm23888-201ENSMUST00000122690 253 ntBASIC6.75□□□□□ -1.33
Mmp13P33435 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6.75□□□□□ -1.33
Mmp13P33435 Gm24545-201ENSMUST00000158651 85 ntBASIC6.75□□□□□ -1.33
Mmp13P33435 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Mmp13P33435 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Mmp13P33435 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Mmp13P33435 Gm37102-201ENSMUST00000195740 1105 ntBASIC6.75□□□□□ -1.33
Mmp13P33435 Gm44342-201ENSMUST00000196874 129 ntBASIC6.75□□□□□ -1.33
Mmp13P33435 Gm44383-201ENSMUST00000198940 129 ntBASIC6.75□□□□□ -1.33
Mmp13P33435 Gm17822-201ENSMUST00000204307 351 ntBASIC6.75□□□□□ -1.33
Mmp13P33435 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.75□□□□□ -1.33
Mmp13P33435 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.75□□□□□ -1.33
Mmp13P33435 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.75□□□□□ -1.33
Mmp13P33435 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.75□□□□□ -1.33
Mmp13P33435 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Mmp13P33435 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Mmp13P33435 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Mmp13P33435 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Mmp13P33435 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.75□□□□□ -1.33
Mmp13P33435 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Mmp13P33435 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.75□□□□□ -1.33
Mmp13P33435 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Mmp13P33435 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Mmp13P33435 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Mmp13P33435 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Mmp13P33435 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Mmp13P33435 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Mmp13P33435 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Mmp13P33435 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Mmp13P33435 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Mmp13P33435 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.74□□□□□ -1.33
Mmp13P33435 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Mmp13P33435 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Mmp13P33435 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.74□□□□□ -1.33
Mmp13P33435 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Mmp13P33435 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Mmp13P33435 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Mmp13P33435 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Mmp13P33435 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Mmp13P33435 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Mmp13P33435 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Mmp13P33435 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Mmp13P33435 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Mmp13P33435 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.74□□□□□ -1.33
Mmp13P33435 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Mmp13P33435 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Mmp13P33435 Gm13732-201ENSMUST00000117753 535 ntBASIC6.74□□□□□ -1.33
Mmp13P33435 Gm6987-201ENSMUST00000119319 428 ntBASIC6.74□□□□□ -1.33
Mmp13P33435 Gm12583-201ENSMUST00000120677 853 ntBASIC6.74□□□□□ -1.33
Mmp13P33435 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.74□□□□□ -1.33
Mmp13P33435 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Mmp13P33435 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC6.74□□□□□ -1.33
Mmp13P33435 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.74□□□□□ -1.33
Mmp13P33435 Gm16297-201ENSMUST00000161466 459 ntBASIC6.74□□□□□ -1.33
Mmp13P33435 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Mmp13P33435 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Mmp13P33435 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Mmp13P33435 Gm19480-201ENSMUST00000185547 667 ntBASIC6.74□□□□□ -1.33
Mmp13P33435 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.74□□□□□ -1.33
Mmp13P33435 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Mmp13P33435 Ighv5-5-201ENSMUST00000193826 329 ntBASIC6.74□□□□□ -1.33
Mmp13P33435 Gm37526-201ENSMUST00000194640 619 ntBASIC6.74□□□□□ -1.33
Mmp13P33435 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Mmp13P33435 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Mmp13P33435 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.74□□□□□ -1.33
Mmp13P33435 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.74□□□□□ -1.33
Mmp13P33435 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.74□□□□□ -1.33
Mmp13P33435 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.74□□□□□ -1.33
Mmp13P33435 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Mmp13P33435 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Mmp13P33435 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Mmp13P33435 Gm5341-201ENSMUST00000058881 489 ntBASIC6.74□□□□□ -1.33
Mmp13P33435 Gm15500-201ENSMUST00000071523 894 ntBASIC6.74□□□□□ -1.33
Mmp13P33435 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Mmp13P33435 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms