Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm14762-201ENSMUST00000105109 1771 ntBASIC6.62□□□□□ -1.35
Lire1P11260 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Lire1P11260 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
Lire1P11260 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Lire1P11260 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Lire1P11260 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Lire1P11260 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Lire1P11260 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Lire1P11260 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Lire1P11260 Gm42798-201ENSMUST00000200853 3972 ntBASIC6.62□□□□□ -1.35
Lire1P11260 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Lire1P11260 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Lire1P11260 Gm25276-201ENSMUST00000104300 124 ntBASIC6.62□□□□□ -1.35
Lire1P11260 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Lire1P11260 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Lire1P11260 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Lire1P11260 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Lire1P11260 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Lire1P11260 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Lire1P11260 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Lire1P11260 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Lire1P11260 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Lire1P11260 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Lire1P11260 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Lire1P11260 Gm9423-201ENSMUST00000183173 997 ntBASIC6.62□□□□□ -1.35
Lire1P11260 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC6.62□□□□□ -1.35
Lire1P11260 Gm38254-201ENSMUST00000192276 1009 ntBASIC6.62□□□□□ -1.35
Lire1P11260 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.62□□□□□ -1.35
Lire1P11260 Gm19035-202ENSMUST00000194575 959 ntBASIC6.62□□□□□ -1.35
Lire1P11260 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Lire1P11260 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Lire1P11260 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Lire1P11260 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC6.62□□□□□ -1.35
Lire1P11260 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Lire1P11260 Gm28392-201ENSMUST00000077630 393 ntBASIC6.62□□□□□ -1.35
Lire1P11260 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Lire1P11260 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.62□□□□□ -1.35
Lire1P11260 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.62□□□□□ -1.35
Lire1P11260 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Lire1P11260 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Lire1P11260 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.62□□□□□ -1.35
Lire1P11260 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Lire1P11260 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.61□□□□□ -1.35
Lire1P11260 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lire1P11260 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lire1P11260 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.61□□□□□ -1.35
Lire1P11260 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lire1P11260 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Lire1P11260 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Lire1P11260 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lire1P11260 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lire1P11260 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lire1P11260 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Lire1P11260 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lire1P11260 Gm13313-201ENSMUST00000118938 1084 ntBASIC6.61□□□□□ -1.35
Lire1P11260 Gm11653-201ENSMUST00000119992 1009 ntBASIC6.61□□□□□ -1.35
Lire1P11260 Gm12222-201ENSMUST00000121368 260 ntBASIC6.61□□□□□ -1.35
Lire1P11260 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC6.61□□□□□ -1.35
Lire1P11260 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC6.61□□□□□ -1.35
Lire1P11260 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lire1P11260 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC6.61□□□□□ -1.35
Lire1P11260 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Lire1P11260 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lire1P11260 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC6.61□□□□□ -1.35
Lire1P11260 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC6.61□□□□□ -1.35
Lire1P11260 Gm28580-201ENSMUST00000186767 88 ntBASIC6.61□□□□□ -1.35
Lire1P11260 Gm8282-201ENSMUST00000187559 483 ntBASIC6.61□□□□□ -1.35
Lire1P11260 Mrgprb13-201ENSMUST00000188191 985 ntBASIC6.61□□□□□ -1.35
Lire1P11260 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC6.61□□□□□ -1.35
Lire1P11260 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC6.61□□□□□ -1.35
Lire1P11260 Gm43160-201ENSMUST00000196453 421 ntBASIC6.61□□□□□ -1.35
Lire1P11260 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lire1P11260 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lire1P11260 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC6.61□□□□□ -1.35
Lire1P11260 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lire1P11260 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC6.61□□□□□ -1.35
Lire1P11260 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC6.61□□□□□ -1.35
Lire1P11260 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC6.61□□□□□ -1.35
Lire1P11260 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lire1P11260 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lire1P11260 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC6.61□□□□□ -1.35
Lire1P11260 Gm46379-201ENSMUST00000222551 265 ntBASIC6.61□□□□□ -1.35
Lire1P11260 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lire1P11260 AC159188.3-201ENSMUST00000224199 880 ntBASIC6.61□□□□□ -1.35
Lire1P11260 AC133958.1-201ENSMUST00000227085 961 ntBASIC6.61□□□□□ -1.35
Lire1P11260 AC165155.1-201ENSMUST00000228932 445 ntBASIC6.61□□□□□ -1.35
Lire1P11260 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lire1P11260 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lire1P11260 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Lire1P11260 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lire1P11260 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.61□□□□□ -1.35
Lire1P11260 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Lire1P11260 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lire1P11260 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
Lire1P11260 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Lire1P11260 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Lire1P11260 Gm20121-201ENSMUST00000198547 1594 ntBASIC6.61□□□□□ -1.35
Lire1P11260 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Lire1P11260 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lire1P11260 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms