Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Hmgb3O54879 Gm5316-201ENSMUST00000050391 270 ntBASIC5.32□□□□□ -1.56
Hmgb3O54879 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Hmgb3O54879 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Hmgb3O54879 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Hmgb3O54879 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Hmgb3O54879 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Hmgb3O54879 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Hmgb3O54879 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Hmgb3O54879 Gm10388-201ENSMUST00000205001 2936 ntBASIC5.32□□□□□ -1.56
Hmgb3O54879 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Hmgb3O54879 Gm37106-201ENSMUST00000193760 1532 ntBASIC5.32□□□□□ -1.56
Hmgb3O54879 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Hmgb3O54879 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Hmgb3O54879 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Hmgb3O54879 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
Hmgb3O54879 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Hmgb3O54879 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hmgb3O54879 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hmgb3O54879 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hmgb3O54879 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm6558-201ENSMUST00000191934 1973 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hmgb3O54879 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm43880-201ENSMUST00000203635 2162 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm43031-201ENSMUST00000198500 1887 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm25760-201ENSMUST00000103989 132 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm25614-201ENSMUST00000104013 133 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm26079-201ENSMUST00000104066 133 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm13525-201ENSMUST00000120607 478 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm12152-201ENSMUST00000122465 684 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 BC064078-201ENSMUST00000122939 570 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC5.31□□□□□ -1.56
Hmgb3O54879 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm7420-201ENSMUST00000162836 842 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm26381-201ENSMUST00000174895 92 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm25574-201ENSMUST00000175245 249 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hmgb3O54879 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm18501-201ENSMUST00000185363 664 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC5.31□□□□□ -1.56
Hmgb3O54879 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC5.31□□□□□ -1.56
Hmgb3O54879 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm44253-201ENSMUST00000203387 628 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hmgb3O54879 AC122305.2-201ENSMUST00000215148 834 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hmgb3O54879 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hmgb3O54879 AC154506.2-201ENSMUST00000225481 1276 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 AC154380.1-201ENSMUST00000226804 720 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 Olfr683-201ENSMUST00000061284 960 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hmgb3O54879 n-R5s56-201ENSMUST00000082521 105 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm37474-201ENSMUST00000194812 1814 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Hmgb3O54879 AC165260.6-206ENSMUST00000223884 3698 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hmgb3O54879 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hmgb3O54879 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm14367-201ENSMUST00000119214 1497 ntBASIC5.31□□□□□ -1.56
Hmgb3O54879 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Hmgb3O54879 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hmgb3O54879 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Hmgb3O54879 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hmgb3O54879 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb3O54879 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Hmgb3O54879 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Hmgb3O54879 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb3O54879 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb3O54879 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb3O54879 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hmgb3O54879 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms