Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm18199-201ENSMUST00000173820 835 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm18191-201ENSMUST00000174624 824 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm21301-201ENSMUST00000189476 699 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm43054-201ENSMUST00000199495 884 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm9519-201ENSMUST00000206108 1337 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Col6a4A2AX52 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm37790-201ENSMUST00000193136 3346 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Tmem161b-206ENSMUST00000225069 2414 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm5406-201ENSMUST00000120054 766 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm15801-201ENSMUST00000120920 522 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm8783-201ENSMUST00000159764 522 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm6921-201ENSMUST00000161478 435 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm17366-201ENSMUST00000167629 187 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm25065-201ENSMUST00000177914 132 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm25891-201ENSMUST00000180050 132 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm17824-201ENSMUST00000197690 805 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm5886-202ENSMUST00000203957 522 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.6□□□□□ -1.51
Col6a4A2AX52 CT009738.1-201ENSMUST00000219031 809 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm9292-201ENSMUST00000222008 710 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm5582-201ENSMUST00000075251 522 ntBASIC5.6□□□□□ -1.51
Col6a4A2AX52 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a4A2AX52 Gm12643-201ENSMUST00000116078 374 ntBASIC5.59□□□□□ -1.51
Col6a4A2AX52 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Gm17217-201ENSMUST00000166613 469 ntBASIC5.59□□□□□ -1.51
Col6a4A2AX52 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Mir3097-201ENSMUST00000175356 67 ntBASIC5.59□□□□□ -1.51
Col6a4A2AX52 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Gm27853-201ENSMUST00000184176 250 ntBASIC5.59□□□□□ -1.51
Col6a4A2AX52 Gm43014-201ENSMUST00000198568 2443 ntBASIC5.59□□□□□ -1.51
Col6a4A2AX52 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC5.59□□□□□ -1.51
Col6a4A2AX52 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col6a4A2AX52 AC132833.4-201ENSMUST00000228313 203 ntBASIC5.59□□□□□ -1.51
Col6a4A2AX52 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a4A2AX52 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col6a4A2AX52 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Gm43254-201ENSMUST00000199187 2491 ntBASIC5.59□□□□□ -1.51
Col6a4A2AX52 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC5.59□□□□□ -1.51
Col6a4A2AX52 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 110.9 ms