Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.32□□□□□ -1.4
Trim3Q9R1R2 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 AC162301.1-201ENSMUST00000228785 1542 ntBASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Gm27158-201ENSMUST00000183813 238 ntBASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Gm37883-201ENSMUST00000194970 725 ntBASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Gm43160-201ENSMUST00000196453 421 ntBASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Gm43906-201ENSMUST00000203194 906 ntBASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 AC124510.2-201ENSMUST00000221958 683 ntBASIC6.31□□□□□ -1.4
Trim3Q9R1R2 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Gm13416-201ENSMUST00000117264 1612 ntBASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.31□□□□□ -1.4
Trim3Q9R1R2 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Gm43187-201ENSMUST00000200652 2397 ntBASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim3Q9R1R2 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Mir678-201ENSMUST00000102114 84 ntBASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Gm19739-201ENSMUST00000195941 153 ntBASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 AC124184.1-201ENSMUST00000218167 283 ntBASIC6.3□□□□□ -1.4
Trim3Q9R1R2 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.3□□□□□ -1.4
Trim3Q9R1R2 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 n-R5s97-201ENSMUST00000082585 113 ntBASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Gm7961-201ENSMUST00000201338 1436 ntBASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms