Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm29470-201ENSMUST00000188007 696 ntBASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Gm28801-201ENSMUST00000188761 449 ntBASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Gm4525-201ENSMUST00000198831 254 ntBASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Gm44225-201ENSMUST00000203582 186 ntBASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Gm44712-201ENSMUST00000206250 1076 ntBASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Gm45509-201ENSMUST00000209624 1229 ntBASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.47□□□□□ -1.37
Lima1Q9ERG0 AV026068-218ENSMUST00000223980 575 ntBASIC6.47□□□□□ -1.37
Lima1Q9ERG0 CT009711.2-202ENSMUST00000224538 973 ntBASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Lima1Q9ERG0 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Lima1Q9ERG0 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Lima1Q9ERG0 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.46□□□□□ -1.37
Lima1Q9ERG0 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.46□□□□□ -1.37
Lima1Q9ERG0 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Lima1Q9ERG0 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.46□□□□□ -1.37
Lima1Q9ERG0 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.46□□□□□ -1.37
Lima1Q9ERG0 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.46□□□□□ -1.37
Lima1Q9ERG0 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm22781-201ENSMUST00000104083 137 ntBASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm25724-201ENSMUST00000104531 117 ntBASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm14904-201ENSMUST00000117067 335 ntBASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm13423-201ENSMUST00000117205 888 ntBASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm14865-201ENSMUST00000117523 494 ntBASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm12654-201ENSMUST00000120387 587 ntBASIC6.46□□□□□ -1.38
Lima1Q9ERG0 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm6726-201ENSMUST00000172786 681 ntBASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm25640-201ENSMUST00000175378 125 ntBASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Mir7011-201ENSMUST00000183768 73 ntBASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm28114-201ENSMUST00000187232 379 ntBASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm29160-201ENSMUST00000190094 699 ntBASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm19739-201ENSMUST00000195941 153 ntBASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm45725-201ENSMUST00000212962 337 ntBASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 AC122305.2-201ENSMUST00000215148 834 ntBASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.46□□□□□ -1.38
Lima1Q9ERG0 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm24519-201ENSMUST00000104507 132 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm11726-201ENSMUST00000121028 424 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm6451-201ENSMUST00000121488 717 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm11581-201ENSMUST00000122024 763 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm22311-201ENSMUST00000158006 110 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm2976-201ENSMUST00000160362 513 ntBASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Lima1Q9ERG0 Gm26381-201ENSMUST00000174895 92 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms