Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gm7804-202ENSMUST00000194187 854 ntBASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gm43141-201ENSMUST00000199695 274 ntBASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gm24036-201ENSMUST00000082868 156 ntBASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Mir296-201ENSMUST00000083587 79 ntBASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gm7731-201ENSMUST00000091759 470 ntBASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.26□□□□□ -1.41
Cdc40Q9DC48 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdc40Q9DC48 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 AC162301.1-201ENSMUST00000228785 1542 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm18248-201ENSMUST00000191164 1846 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm22284-201ENSMUST00000104132 132 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm24473-201ENSMUST00000104483 131 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm13137-201ENSMUST00000118035 345 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm15712-201ENSMUST00000120369 1156 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm12181-201ENSMUST00000121448 531 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm25395-201ENSMUST00000157343 272 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm20530-201ENSMUST00000174261 254 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm22990-201ENSMUST00000175427 89 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm6061-201ENSMUST00000175860 492 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm5334-201ENSMUST00000187472 720 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm28801-201ENSMUST00000188761 449 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm19185-201ENSMUST00000196365 643 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm4870-201ENSMUST00000198525 1251 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm44411-201ENSMUST00000204172 349 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 AC165349.1-201ENSMUST00000217896 424 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm19154-201ENSMUST00000223330 940 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 AC116596.2-203ENSMUST00000227345 731 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 AC133203.1-201ENSMUST00000228241 301 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdc40Q9DC48 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.25□□□□□ -1.41
Cdc40Q9DC48 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdc40Q9DC48 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms