Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Mef2c-225ENSMUST00000199210 1185 ntTSL 5 BASIC7.61□□□□□ -1.19
Trim42Q9D2H5 Gm32842-201ENSMUST00000212653 738 ntBASIC7.61□□□□□ -1.19
Trim42Q9D2H5 AC153821.1-203ENSMUST00000218105 607 ntTSL 3 BASIC7.61□□□□□ -1.19
Trim42Q9D2H5 AC157570.2-201ENSMUST00000219091 700 ntBASIC7.61□□□□□ -1.19
Trim42Q9D2H5 AC207128.2-202ENSMUST00000224010 808 ntBASIC7.61□□□□□ -1.19
Trim42Q9D2H5 AC154747.2-201ENSMUST00000225109 780 ntBASIC7.61□□□□□ -1.19
Trim42Q9D2H5 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Trim42Q9D2H5 AC117202.3-201ENSMUST00000228532 310 ntBASIC7.61□□□□□ -1.19
Trim42Q9D2H5 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim42Q9D2H5 Ubd-201ENSMUST00000038844 931 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim42Q9D2H5 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC7.61□□□□□ -1.19
Trim42Q9D2H5 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
Trim42Q9D2H5 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim42Q9D2H5 Elavl2-203ENSMUST00000107109 1591 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
Trim42Q9D2H5 Elavl2-205ENSMUST00000107111 1552 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
Trim42Q9D2H5 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim42Q9D2H5 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim42Q9D2H5 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim42Q9D2H5 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim42Q9D2H5 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC7.61□□□□□ -1.19
Trim42Q9D2H5 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC7.61□□□□□ -1.19
Trim42Q9D2H5 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC7.61□□□□□ -1.19
Trim42Q9D2H5 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 AC154738.6-201ENSMUST00000227225 1352 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm26209-201ENSMUST00000103852 110 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm14419-201ENSMUST00000108975 683 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm9432-201ENSMUST00000117810 759 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm13526-201ENSMUST00000117970 189 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm14682-201ENSMUST00000117977 524 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm7831-201ENSMUST00000117990 552 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm12067-201ENSMUST00000119755 1148 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm8832-201ENSMUST00000119890 395 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Bdh2-202ENSMUST00000120397 1172 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm14360-201ENSMUST00000120670 393 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 1700003M07Rik-201ENSMUST00000139884 541 ntTSL 2 BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm23467-201ENSMUST00000157127 159 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm22836-201ENSMUST00000158441 61 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm22649-201ENSMUST00000175134 298 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm25735-201ENSMUST00000175164 215 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 AF067061-202ENSMUST00000181748 881 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm27043-201ENSMUST00000182807 958 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Nanog-ps1-201ENSMUST00000188967 250 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm21742-201ENSMUST00000189352 548 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm29138-201ENSMUST00000191444 348 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm10522-201ENSMUST00000194503 1163 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm38360-201ENSMUST00000195130 454 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm17978-201ENSMUST00000195986 769 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm9236-201ENSMUST00000196892 587 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm43471-201ENSMUST00000197550 467 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm2939-201ENSMUST00000198496 478 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm44705-201ENSMUST00000206719 339 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm2225-201ENSMUST00000209570 377 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm7727-201ENSMUST00000219830 671 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 4930428N03Rik-205ENSMUST00000225654 892 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Tssk4-203ENSMUST00000226497 1235 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 AC129537.1-201ENSMUST00000226596 1228 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Tssk4-206ENSMUST00000228041 1217 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Borcs8-201ENSMUST00000002418 810 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gstm5-201ENSMUST00000004134 945 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Olfr698-201ENSMUST00000074981 936 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm24268-201ENSMUST00000082990 110 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Olfr1143-201ENSMUST00000090708 945 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Folr2-201ENSMUST00000094141 1067 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Tm4sf20-201ENSMUST00000027331 1508 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm45221-201ENSMUST00000207822 2272 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 AC122356.1-202ENSMUST00000227328 2758 ntBASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Trim42Q9D2H5 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 121.5 ms