Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm23757-201ENSMUST00000158353 100 ntBASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Gm29663-201ENSMUST00000186962 853 ntBASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Gm28801-201ENSMUST00000188761 449 ntBASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Gm4751-201ENSMUST00000200620 1105 ntBASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Gm17822-201ENSMUST00000204307 351 ntBASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Gm43905-201ENSMUST00000204516 204 ntBASIC7.53□□□□□ -1.2
Smc1aQ9CU62 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Gm18789-201ENSMUST00000216115 550 ntBASIC7.53□□□□□ -1.2
Smc1aQ9CU62 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 AC124183.1-201ENSMUST00000222367 2135 ntBASIC7.53□□□□□ -1.2
Smc1aQ9CU62 AC159267.1-201ENSMUST00000226702 678 ntBASIC7.53□□□□□ -1.2
Smc1aQ9CU62 CT009556.4-201ENSMUST00000227092 200 ntBASIC7.53□□□□□ -1.2
Smc1aQ9CU62 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Gm29486-201ENSMUST00000088648 372 ntBASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 AC022682.2-202ENSMUST00000224394 3943 ntBASIC7.53□□□□□ -1.2
Smc1aQ9CU62 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Smc1aQ9CU62 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC7.52□□□□□ -1.2
Smc1aQ9CU62 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Smc1aQ9CU62 Gm37262-201ENSMUST00000192816 1818 ntBASIC7.52□□□□□ -1.2
Smc1aQ9CU62 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC7.52□□□□□ -1.2
Smc1aQ9CU62 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Smc1aQ9CU62 Gm42989-201ENSMUST00000200646 2306 ntBASIC7.52□□□□□ -1.2
Smc1aQ9CU62 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Gm22256-201ENSMUST00000102291 107 ntBASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Gm11609-201ENSMUST00000121926 793 ntBASIC7.52□□□□□ -1.21
Smc1aQ9CU62 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Gm26323-201ENSMUST00000157743 175 ntBASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Gm10136-201ENSMUST00000183196 435 ntBASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Mir6244-201ENSMUST00000184156 117 ntBASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Gm28952-201ENSMUST00000189285 681 ntBASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 AC163667.1-201ENSMUST00000225201 1289 ntBASIC7.52□□□□□ -1.21
Smc1aQ9CU62 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Gm13416-201ENSMUST00000117264 1612 ntBASIC7.52□□□□□ -1.21
Smc1aQ9CU62 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Smc1aQ9CU62 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Gm37913-201ENSMUST00000192925 2544 ntBASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Pramel-201ENSMUST00000118979 1383 ntBASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Gm12468-201ENSMUST00000116189 404 ntBASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Gm14729-201ENSMUST00000118373 689 ntBASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Apc-ps1-201ENSMUST00000119356 470 ntBASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Gm15596-201ENSMUST00000121139 784 ntBASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Gm22311-201ENSMUST00000158006 110 ntBASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Mir1929-201ENSMUST00000158635 93 ntBASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Gm7867-201ENSMUST00000189856 546 ntBASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Gm37439-201ENSMUST00000193150 856 ntBASIC7.51□□□□□ -1.21
Smc1aQ9CU62 Gm43033-201ENSMUST00000199682 425 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms