Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm24519-201ENSMUST00000104507 132 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm6743-201ENSMUST00000117345 1066 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm11903-201ENSMUST00000118958 727 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm13754-201ENSMUST00000120486 998 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm13462-201ENSMUST00000121472 961 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm24781-201ENSMUST00000157636 117 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Use1Q9CQ56 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm17997-201ENSMUST00000211801 840 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm45888-201ENSMUST00000212348 1229 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Mif-ps7-201ENSMUST00000223357 327 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Use1Q9CQ56 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.24□□□□□ -1.41
Use1Q9CQ56 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Use1Q9CQ56 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Use1Q9CQ56 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Serpina3h-202ENSMUST00000116393 1226 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm15310-201ENSMUST00000117891 372 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm13463-201ENSMUST00000119020 233 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm12104-201ENSMUST00000120359 979 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm4887-201ENSMUST00000122230 1053 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm26211-201ENSMUST00000158578 129 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm17205-201ENSMUST00000168370 1207 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm18848-201ENSMUST00000182069 792 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Mir6940-201ENSMUST00000183447 70 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm27970-201ENSMUST00000184854 407 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC6.23□□□□□ -1.41
Use1Q9CQ56 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm9604-201ENSMUST00000211175 433 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm45514-201ENSMUST00000211531 689 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.23□□□□□ -1.41
Use1Q9CQ56 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Use1Q9CQ56 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Use1Q9CQ56 AC154515.3-201ENSMUST00000225081 1159 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 1094.2 ms