Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm44705-201ENSMUST00000206719 339 ntBASIC6.47□□□□□ -1.37
Cdh23Q99PF4 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC6.47□□□□□ -1.37
Cdh23Q99PF4 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Gimap4-201ENSMUST00000067506 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdh23Q99PF4 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Gm22778-201ENSMUST00000104090 128 ntBASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Gm8480-201ENSMUST00000190350 698 ntBASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Gm43946-201ENSMUST00000204058 886 ntBASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Gm44952-201ENSMUST00000204443 433 ntBASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Gm45249-201ENSMUST00000211021 348 ntBASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Lpin1-202ENSMUST00000111067 5433 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Nfia-203ENSMUST00000092532 9382 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Dock1-201ENSMUST00000084488 6807 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Pard3b-203ENSMUST00000094906 7676 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Cdh23Q99PF4 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Cdh23Q99PF4 Gm12936-201ENSMUST00000121439 301 ntBASIC6.46□□□□□ -1.37
Cdh23Q99PF4 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Cdh23Q99PF4 Gm26172-201ENSMUST00000158421 134 ntBASIC6.46□□□□□ -1.37
Cdh23Q99PF4 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
Cdh23Q99PF4 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Cdh23Q99PF4 Mir6362-201ENSMUST00000184329 107 ntBASIC6.46□□□□□ -1.37
Cdh23Q99PF4 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC6.46□□□□□ -1.37
Cdh23Q99PF4 Akap6-202ENSMUST00000219786 4564 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Cdh23Q99PF4 Gm37274-201ENSMUST00000192167 1682 ntBASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Gm24989-201ENSMUST00000104461 88 ntBASIC6.46□□□□□ -1.38
Cdh23Q99PF4 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Gm14202-201ENSMUST00000120121 311 ntBASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Gm21728-201ENSMUST00000188442 695 ntBASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Gm21889-201ENSMUST00000188487 695 ntBASIC6.46□□□□□ -1.38
Cdh23Q99PF4 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Gm21920-201ENSMUST00000190042 695 ntBASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Gm37376-201ENSMUST00000192176 453 ntBASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Gm43222-201ENSMUST00000199013 603 ntBASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Gm4032-201ENSMUST00000210886 487 ntBASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Plekha6-201ENSMUST00000038295 7388 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Gm43062-201ENSMUST00000196302 1319 ntBASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Itgam-201ENSMUST00000064821 4682 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Gm12436-201ENSMUST00000131099 2959 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Gm37570-201ENSMUST00000195411 3106 ntBASIC6.46□□□□□ -1.38
Cdh23Q99PF4 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Gm16089-201ENSMUST00000117679 336 ntBASIC6.46□□□□□ -1.38
Cdh23Q99PF4 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Sipa1l1-205ENSMUST00000220963 5907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdh23Q99PF4 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Cdh23Q99PF4 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC6.45□□□□□ -1.38
Cdh23Q99PF4 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdh23Q99PF4 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdh23Q99PF4 AC154377.1-201ENSMUST00000226752 4979 ntBASIC6.45□□□□□ -1.38
Cdh23Q99PF4 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Cdh23Q99PF4 Gm12402-201ENSMUST00000120536 334 ntBASIC6.45□□□□□ -1.38
Cdh23Q99PF4 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC6.45□□□□□ -1.38
Cdh23Q99PF4 Gm5353-201ENSMUST00000139800 793 ntBASIC6.45□□□□□ -1.38
Cdh23Q99PF4 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Cdh23Q99PF4 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Cdh23Q99PF4 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms