Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Msh4Q99MT2 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Msh4Q99MT2 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Msh4Q99MT2 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.58□□□□□ -1.36
Msh4Q99MT2 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Gm23888-201ENSMUST00000122690 253 ntBASIC6.58□□□□□ -1.36
Msh4Q99MT2 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Gm16297-201ENSMUST00000161466 459 ntBASIC6.58□□□□□ -1.36
Msh4Q99MT2 Gm4956-202ENSMUST00000178869 672 ntBASIC6.58□□□□□ -1.36
Msh4Q99MT2 Gm26570-201ENSMUST00000180672 342 ntBASIC6.58□□□□□ -1.36
Msh4Q99MT2 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.58□□□□□ -1.36
Msh4Q99MT2 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Gm29747-201ENSMUST00000194764 585 ntBASIC6.58□□□□□ -1.36
Msh4Q99MT2 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC6.58□□□□□ -1.36
Msh4Q99MT2 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Msh4Q99MT2 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC6.58□□□□□ -1.36
Msh4Q99MT2 AC159188.3-201ENSMUST00000224199 880 ntBASIC6.58□□□□□ -1.36
Msh4Q99MT2 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.58□□□□□ -1.36
Msh4Q99MT2 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.58□□□□□ -1.36
Msh4Q99MT2 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Msh4Q99MT2 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gm45885-202ENSMUST00000211520 1383 ntBASIC6.57□□□□□ -1.36
Msh4Q99MT2 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.57□□□□□ -1.36
Msh4Q99MT2 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gm6382-201ENSMUST00000118873 942 ntBASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gm13754-201ENSMUST00000120486 998 ntBASIC6.57□□□□□ -1.36
Msh4Q99MT2 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gm24685-201ENSMUST00000157764 285 ntBASIC6.57□□□□□ -1.36
Msh4Q99MT2 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC6.57□□□□□ -1.36
Msh4Q99MT2 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gm25617-201ENSMUST00000179548 133 ntBASIC6.57□□□□□ -1.36
Msh4Q99MT2 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gm25617-202ENSMUST00000198387 132 ntBASIC6.57□□□□□ -1.36
Msh4Q99MT2 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gm44412-201ENSMUST00000203018 294 ntBASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gm21054-201ENSMUST00000203981 380 ntBASIC6.57□□□□□ -1.36
Msh4Q99MT2 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 AL713985.1-201ENSMUST00000219030 420 ntBASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gm9315-201ENSMUST00000222696 908 ntBASIC6.57□□□□□ -1.36
Msh4Q99MT2 AC125405.2-201ENSMUST00000227862 383 ntBASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.57□□□□□ -1.36
Msh4Q99MT2 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Msh4Q99MT2 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Msh4Q99MT2 Amy2b-201ENSMUST00000120184 1577 ntBASIC6.57□□□□□ -1.36
Msh4Q99MT2 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Msh4Q99MT2 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Msh4Q99MT2 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.56□□□□□ -1.36
Msh4Q99MT2 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
Msh4Q99MT2 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Msh4Q99MT2 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Msh4Q99MT2 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms