Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC8.79□□□□□ -1
RtcbQ99LF4 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
RtcbQ99LF4 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC8.79□□□□□ -1
RtcbQ99LF4 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
RtcbQ99LF4 Gm2966-201ENSMUST00000166052 481 ntBASIC8.79□□□□□ -1
RtcbQ99LF4 Gm17204-201ENSMUST00000167936 478 ntBASIC8.79□□□□□ -1
RtcbQ99LF4 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
RtcbQ99LF4 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
RtcbQ99LF4 Mir3078-201ENSMUST00000175231 87 ntBASIC8.79□□□□□ -1
RtcbQ99LF4 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC8.79□□□□□ -1
RtcbQ99LF4 Gm18303-201ENSMUST00000190055 1176 ntBASIC8.79□□□□□ -1
RtcbQ99LF4 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC8.79□□□□□ -1
RtcbQ99LF4 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
RtcbQ99LF4 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC8.79□□□□□ -1
RtcbQ99LF4 Gm43141-201ENSMUST00000199695 274 ntBASIC8.79□□□□□ -1
RtcbQ99LF4 Gm43116-201ENSMUST00000199789 195 ntBASIC8.79□□□□□ -1
RtcbQ99LF4 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
RtcbQ99LF4 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
RtcbQ99LF4 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC8.79□□□□□ -1
RtcbQ99LF4 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC8.79□□□□□ -1
RtcbQ99LF4 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC8.79□□□□□ -1
RtcbQ99LF4 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC8.79□□□□□ -1
RtcbQ99LF4 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RtcbQ99LF4 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
RtcbQ99LF4 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC8.79□□□□□ -1
RtcbQ99LF4 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC8.79□□□□□ -1
RtcbQ99LF4 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RtcbQ99LF4 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
RtcbQ99LF4 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
RtcbQ99LF4 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RtcbQ99LF4 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
RtcbQ99LF4 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
RtcbQ99LF4 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
RtcbQ99LF4 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
RtcbQ99LF4 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC8.79□□□□□ -1
RtcbQ99LF4 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RtcbQ99LF4 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC8.79□□□□□ -1
RtcbQ99LF4 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC8.79□□□□□ -1
RtcbQ99LF4 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
RtcbQ99LF4 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC8.79□□□□□ -1
RtcbQ99LF4 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
RtcbQ99LF4 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC8.78□□□□□ -1
RtcbQ99LF4 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Gm45407-201ENSMUST00000209499 3676 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 AC159635.1-201ENSMUST00000220905 2102 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
RtcbQ99LF4 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Gm44104-201ENSMUST00000204736 3777 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC8.78□□□□□ -1
RtcbQ99LF4 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
RtcbQ99LF4 Gm12842-201ENSMUST00000117298 476 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 Gm2288-201ENSMUST00000118560 638 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
RtcbQ99LF4 Gm12577-201ENSMUST00000119701 574 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 Gm5406-201ENSMUST00000120054 766 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Gm24435-201ENSMUST00000157886 110 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 Gm25435-201ENSMUST00000158277 267 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 Gm23450-201ENSMUST00000178285 91 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 Gm5260-201ENSMUST00000186157 949 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 Gm28846-201ENSMUST00000189161 368 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 Gm44943-201ENSMUST00000207254 300 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 Gm8637-201ENSMUST00000212919 1085 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC8.78□□□□□ -1
RtcbQ99LF4 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Gm5928-201ENSMUST00000221839 466 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 AC138329.1-201ENSMUST00000225040 471 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 AC130673.2-201ENSMUST00000228091 797 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC8.78□□□□□ -1
RtcbQ99LF4 Gm15500-201ENSMUST00000071523 894 ntBASIC8.78□□□□□ -1
RtcbQ99LF4 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
RtcbQ99LF4 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RtcbQ99LF4 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC8.78□□□□□ -1
RtcbQ99LF4 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms