Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc87Q8CDL9 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc87Q8CDL9 Gm45172-201ENSMUST00000206054 1301 ntBASIC7.26□□□□□ -1.25
Ccdc87Q8CDL9 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm38026-201ENSMUST00000193284 3880 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm18830-201ENSMUST00000199036 1396 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Mir678-201ENSMUST00000102114 84 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm11864-201ENSMUST00000116179 1220 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm14727-201ENSMUST00000118526 525 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm15484-201ENSMUST00000118871 828 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm14721-201ENSMUST00000121381 525 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm11263-201ENSMUST00000121853 749 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm24442-201ENSMUST00000157238 327 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm24057-201ENSMUST00000158616 302 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm7420-201ENSMUST00000162836 842 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm7244-201ENSMUST00000164658 455 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm17149-201ENSMUST00000164712 375 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Mir6357-201ENSMUST00000184246 104 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm28149-201ENSMUST00000187102 378 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm28768-201ENSMUST00000189034 378 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm28070-201ENSMUST00000191502 445 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm44147-201ENSMUST00000204658 94 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm19007-201ENSMUST00000217746 874 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 CT030166.4-201ENSMUST00000220640 404 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 AC154849.2-201ENSMUST00000223781 974 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 AC139294.2-201ENSMUST00000227159 285 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Gm24405-201ENSMUST00000083033 167 ntBASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Ccdc87Q8CDL9 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 AC168056.3-201ENSMUST00000225395 2540 ntBASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Gm13739-201ENSMUST00000118020 530 ntBASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Gm11987-201ENSMUST00000118524 381 ntBASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Gm5754-201ENSMUST00000118774 892 ntBASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Gm8312-201ENSMUST00000119380 618 ntBASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Gm15712-201ENSMUST00000120369 1156 ntBASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Gm15188-201ENSMUST00000121264 704 ntBASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Gm23077-201ENSMUST00000157854 116 ntBASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Gm16102-201ENSMUST00000160955 420 ntBASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Gm11107-201ENSMUST00000165414 505 ntBASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Gm3208-201ENSMUST00000168281 427 ntBASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Gm17205-201ENSMUST00000168370 1207 ntBASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Mir6374-201ENSMUST00000184003 107 ntBASIC7.24□□□□□ -1.25
Ccdc87Q8CDL9 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms