Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm44046-201ENSMUST00000203145 2678 ntBASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc40Q8BI79 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Gm10936-201ENSMUST00000105264 252 ntBASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 n-R5s201-201ENSMUST00000122622 116 ntBASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Gm28801-201ENSMUST00000188761 449 ntBASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Gm44705-201ENSMUST00000206719 339 ntBASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Gm6562-201ENSMUST00000221903 464 ntBASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Gm44231-201ENSMUST00000204106 4075 ntBASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Gm37911-201ENSMUST00000193099 1545 ntBASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Gm37076-201ENSMUST00000192033 2294 ntBASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 AC161247.1-201ENSMUST00000217744 2295 ntBASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC7.01□□□□□ -1.29
Ccdc40Q8BI79 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm37953-201ENSMUST00000195293 1884 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm7155-201ENSMUST00000121143 1671 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ccdc40Q8BI79 AC187103.1-201ENSMUST00000224641 1475 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Ccdc40Q8BI79 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm38366-201ENSMUST00000193127 1934 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm44289-201ENSMUST00000204144 1390 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm15129-201ENSMUST00000119673 279 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm4914-201ENSMUST00000119757 459 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm12104-201ENSMUST00000120359 979 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Mir1981-201ENSMUST00000157934 82 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm26959-201ENSMUST00000182376 978 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm27014-201ENSMUST00000182658 937 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm28149-201ENSMUST00000187102 378 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm28768-201ENSMUST00000189034 378 ntBASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC7□□□□□ -1.29
Ccdc40Q8BI79 Gm43664-201ENSMUST00000196038 734 ntBASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms