Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Vps54Q5SPW0 Gm42462-201ENSMUST00000196543 1363 ntBASIC7.92□□□□□ -1.14
Vps54Q5SPW0 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC7.92□□□□□ -1.14
Vps54Q5SPW0 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC7.92□□□□□ -1.14
Vps54Q5SPW0 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Vps54Q5SPW0 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC7.92□□□□□ -1.14
Vps54Q5SPW0 AC159002.2-201ENSMUST00000228843 4874 ntBASIC7.92□□□□□ -1.14
Vps54Q5SPW0 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Vps54Q5SPW0 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Vps54Q5SPW0 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 AC135669.2-201ENSMUST00000215636 4958 ntBASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Gm12439-201ENSMUST00000117162 365 ntBASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Gm13207-201ENSMUST00000119862 773 ntBASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Gm15181-201ENSMUST00000120142 177 ntBASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Gm43048-201ENSMUST00000196101 388 ntBASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Gm44163-201ENSMUST00000205140 475 ntBASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 AC115793.1-201ENSMUST00000216605 215 ntBASIC7.91□□□□□ -1.14
Vps54Q5SPW0 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Gm20121-201ENSMUST00000198547 1594 ntBASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 AC129208.1-201ENSMUST00000227474 2906 ntBASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC7.91□□□□□ -1.14
Vps54Q5SPW0 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Gm37216-201ENSMUST00000193817 3478 ntBASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 AC154406.1-201ENSMUST00000215220 2529 ntBASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Gm24173-201ENSMUST00000104130 128 ntBASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Gm24888-201ENSMUST00000104387 130 ntBASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Gm11893-201ENSMUST00000117829 491 ntBASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Gm14158-201ENSMUST00000118409 308 ntBASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Gm18447-201ENSMUST00000187501 307 ntBASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Gm43772-201ENSMUST00000202052 379 ntBASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Gm4556-201ENSMUST00000217808 355 ntBASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 AC174082.2-201ENSMUST00000222094 543 ntBASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Gm18955-201ENSMUST00000223173 649 ntBASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Vps54Q5SPW0 AC129085.2-201ENSMUST00000223763 2800 ntBASIC7.9□□□□□ -1.15
Vps54Q5SPW0 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Vps54Q5SPW0 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
Vps54Q5SPW0 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.15
Vps54Q5SPW0 Gm43285-201ENSMUST00000196563 3592 ntBASIC7.9□□□□□ -1.15
Vps54Q5SPW0 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.15
Vps54Q5SPW0 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Vps54Q5SPW0 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Vps54Q5SPW0 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms