Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm25891-201ENSMUST00000180050 132 ntBASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Gm3544-201ENSMUST00000196129 305 ntBASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Gm9710-201ENSMUST00000198053 499 ntBASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Gm36501-201ENSMUST00000221857 745 ntBASIC8.18□□□□□ -1.1
Shank3Q4ACU6 AC105950.1-201ENSMUST00000222637 408 ntBASIC8.18□□□□□ -1.1
Shank3Q4ACU6 AC192333.6-201ENSMUST00000224565 725 ntBASIC8.18□□□□□ -1.1
Shank3Q4ACU6 AC154250.1-201ENSMUST00000224775 489 ntBASIC8.18□□□□□ -1.1
Shank3Q4ACU6 AC122393.2-201ENSMUST00000226404 1093 ntBASIC8.18□□□□□ -1.1
Shank3Q4ACU6 AC125117.2-201ENSMUST00000228344 1140 ntBASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Gm22053-201ENSMUST00000083394 200 ntBASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Naa25-201ENSMUST00000042163 5447 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Wnk1-218ENSMUST00000161512 1426 ntBASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Gm43421-201ENSMUST00000200044 2905 ntBASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Grik1-209ENSMUST00000227986 2942 ntBASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Gm44620-201ENSMUST00000209183 2887 ntBASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Shank3Q4ACU6 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Gm12768-201ENSMUST00000120055 759 ntBASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Gm15781-201ENSMUST00000120216 323 ntBASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Gm26023-201ENSMUST00000122722 313 ntBASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Gm6631-201ENSMUST00000193699 559 ntBASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 CT030254.1-201ENSMUST00000225450 1078 ntBASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Mir331-201ENSMUST00000083673 96 ntBASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Plekha2-201ENSMUST00000064883 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Gm15903-202ENSMUST00000199631 3518 ntBASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 AC123629.1-201ENSMUST00000225669 1364 ntBASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Gm11105-201ENSMUST00000112781 478 ntBASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Gm14356-201ENSMUST00000118322 869 ntBASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Gm7931-201ENSMUST00000121537 271 ntBASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Gm21772-201ENSMUST00000169213 478 ntBASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Gm17126-201ENSMUST00000172276 523 ntBASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Gm43235-201ENSMUST00000200121 297 ntBASIC8.17□□□□□ -1.1
Shank3Q4ACU6 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Gm10688-201ENSMUST00000214985 520 ntBASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC8.17□□□□□ -1.1
Shank3Q4ACU6 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shank3Q4ACU6 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shank3Q4ACU6 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shank3Q4ACU6 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shank3Q4ACU6 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shank3Q4ACU6 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shank3Q4ACU6 AC156025.3-201ENSMUST00000225919 3095 ntBASIC8.16□□□□□ -1.1
Shank3Q4ACU6 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shank3Q4ACU6 Gm11885-201ENSMUST00000118473 1428 ntBASIC8.16□□□□□ -1.1
Shank3Q4ACU6 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Shank3Q4ACU6 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Shank3Q4ACU6 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Shank3Q4ACU6 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
Shank3Q4ACU6 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Shank3Q4ACU6 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
Shank3Q4ACU6 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC8.16□□□□□ -1.1
Shank3Q4ACU6 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Shank3Q4ACU6 Gm5110-201ENSMUST00000203122 1063 ntBASIC8.16□□□□□ -1.1
Shank3Q4ACU6 Gm7825-201ENSMUST00000204046 416 ntBASIC8.16□□□□□ -1.1
Shank3Q4ACU6 Gm18943-201ENSMUST00000207357 1216 ntBASIC8.16□□□□□ -1.1
Shank3Q4ACU6 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Shank3Q4ACU6 Gm45750-201ENSMUST00000211966 354 ntBASIC8.16□□□□□ -1.1
Shank3Q4ACU6 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms