Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm9439-201ENSMUST00000119554 973 ntBASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Gm26381-201ENSMUST00000174895 92 ntBASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Mir6987-201ENSMUST00000184789 73 ntBASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Gm29072-201ENSMUST00000191149 678 ntBASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 AC127242.3-201ENSMUST00000222009 580 ntBASIC7.03□□□□□ -1.28
Trim43aQ3TL54 AC165157.1-201ENSMUST00000222981 580 ntBASIC7.03□□□□□ -1.28
Trim43aQ3TL54 AC132833.4-201ENSMUST00000228313 203 ntBASIC7.03□□□□□ -1.28
Trim43aQ3TL54 n-R5s56-201ENSMUST00000082521 105 ntBASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim43aQ3TL54 AC116950.1-201ENSMUST00000226322 3250 ntBASIC7.03□□□□□ -1.28
Trim43aQ3TL54 Gm43088-201ENSMUST00000197530 2347 ntBASIC7.02□□□□□ -1.28
Trim43aQ3TL54 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
Trim43aQ3TL54 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC7.02□□□□□ -1.28
Trim43aQ3TL54 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Trim43aQ3TL54 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm44895-201ENSMUST00000206670 1538 ntBASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm25760-201ENSMUST00000103989 132 ntBASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm25311-201ENSMUST00000104136 132 ntBASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm26416-201ENSMUST00000104280 134 ntBASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm14870-201ENSMUST00000118414 156 ntBASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm5387-201ENSMUST00000119776 857 ntBASIC7.02□□□□□ -1.29
Trim43aQ3TL54 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm25969-201ENSMUST00000157166 132 ntBASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm25962-201ENSMUST00000157173 168 ntBASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm24781-201ENSMUST00000157636 117 ntBASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm27970-201ENSMUST00000184854 407 ntBASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Ighv1-30-201ENSMUST00000194082 349 ntBASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm2398-201ENSMUST00000218347 883 ntBASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 CT009711.2-202ENSMUST00000224538 973 ntBASIC7.02□□□□□ -1.29
Trim43aQ3TL54 AC106830.2-201ENSMUST00000226624 943 ntBASIC7.02□□□□□ -1.29
Trim43aQ3TL54 AC122397.3-201ENSMUST00000227097 527 ntBASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm25587-201ENSMUST00000082498 166 ntBASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Gm43031-201ENSMUST00000198500 1887 ntBASIC7.02□□□□□ -1.29
Trim43aQ3TL54 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 AC125328.1-201ENSMUST00000226812 2265 ntBASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim43aQ3TL54 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Gm46199-201ENSMUST00000220373 1693 ntBASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Gm13739-201ENSMUST00000118020 530 ntBASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Gm13265-201ENSMUST00000118090 421 ntBASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Gm11653-201ENSMUST00000119992 1009 ntBASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Gm13735-201ENSMUST00000120217 670 ntBASIC7.01□□□□□ -1.29
Trim43aQ3TL54 M6pr-ps-201ENSMUST00000120481 830 ntBASIC7.01□□□□□ -1.29
Trim43aQ3TL54 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim43aQ3TL54 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms