Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC4.38□□□□□ -1.71
PrkdcP97313 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC4.38□□□□□ -1.71
PrkdcP97313 Gm37310-201ENSMUST00000195237 2968 ntBASIC4.38□□□□□ -1.71
PrkdcP97313 Gm19972-201ENSMUST00000218180 5664 ntBASIC4.38□□□□□ -1.71
PrkdcP97313 Gm8853-201ENSMUST00000198366 1344 ntBASIC4.38□□□□□ -1.71
PrkdcP97313 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PrkdcP97313 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 CT010470.1-201ENSMUST00000225364 1876 ntBASIC4.38□□□□□ -1.71
PrkdcP97313 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Sgsh-202ENSMUST00000100172 4223 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 1700020I14Rik-202ENSMUST00000153581 8300 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PrkdcP97313 Gm24989-201ENSMUST00000104461 88 ntBASIC4.38□□□□□ -1.71
PrkdcP97313 Gm14870-201ENSMUST00000118414 156 ntBASIC4.38□□□□□ -1.71
PrkdcP97313 Gm25534-201ENSMUST00000175365 125 ntBASIC4.38□□□□□ -1.71
PrkdcP97313 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC4.38□□□□□ -1.71
PrkdcP97313 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PrkdcP97313 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PrkdcP97313 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PrkdcP97313 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 Chid1-209ENSMUST00000166082 4222 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PrkdcP97313 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Gm24886-201ENSMUST00000104384 123 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 Gm14202-201ENSMUST00000120121 311 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC4.37□□□□□ -1.71
PrkdcP97313 Gm20674-201ENSMUST00000177452 369 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 Gm18444-201ENSMUST00000191239 629 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 Gm37493-201ENSMUST00000193167 433 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Gm34224-201ENSMUST00000204606 364 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 CT030175.1-201ENSMUST00000220822 408 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PrkdcP97313 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PrkdcP97313 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
PrkdcP97313 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
PrkdcP97313 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Gm43496-201ENSMUST00000201682 3001 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 AC158988.1-201ENSMUST00000226731 2624 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Htr4-201ENSMUST00000027560 4657 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PrkdcP97313 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Gm22492-201ENSMUST00000157192 297 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 Gm21735-201ENSMUST00000190360 696 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 Gm18865-201ENSMUST00000193011 1171 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 Gm20926-201ENSMUST00000194457 696 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 AC131745.1-201ENSMUST00000223660 330 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 AC166369.2-201ENSMUST00000228403 308 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PrkdcP97313 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PrkdcP97313 Wdr37-201ENSMUST00000021572 4526 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PrkdcP97313 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
PrkdcP97313 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PrkdcP97313 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PrkdcP97313 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
PrkdcP97313 Stk11ip-202ENSMUST00000113553 4153 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Gm38009-201ENSMUST00000194884 3341 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Gm15237-201ENSMUST00000122104 469 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 Mirt2-201ENSMUST00000175179 285 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 Gm6931-201ENSMUST00000183103 371 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC4.37□□□□□ -1.71
PrkdcP97313 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC4.37□□□□□ -1.71
PrkdcP97313 AC131117.2-203ENSMUST00000225886 950 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 AC164295.2-201ENSMUST00000228539 757 ntBASIC4.37□□□□□ -1.71
PrkdcP97313 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PrkdcP97313 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PrkdcP97313 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms