Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Rnu11-201ENSMUST00000104135 134 ntBASIC7.3□□□□□ -1.24
CiitaP79621 Gm12939-201ENSMUST00000117303 165 ntBASIC7.3□□□□□ -1.24
CiitaP79621 Gm13137-201ENSMUST00000118035 345 ntBASIC7.3□□□□□ -1.24
CiitaP79621 Gm14870-201ENSMUST00000118414 156 ntBASIC7.3□□□□□ -1.24
CiitaP79621 Gm5319-201ENSMUST00000118965 873 ntBASIC7.3□□□□□ -1.24
CiitaP79621 Gm3810-201ENSMUST00000122413 476 ntBASIC7.3□□□□□ -1.24
CiitaP79621 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC7.3□□□□□ -1.24
CiitaP79621 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CiitaP79621 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC7.3□□□□□ -1.24
CiitaP79621 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CiitaP79621 Gm4997-201ENSMUST00000154056 360 ntBASIC7.3□□□□□ -1.24
CiitaP79621 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC7.3□□□□□ -1.24
CiitaP79621 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
CiitaP79621 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CiitaP79621 Gm37493-201ENSMUST00000193167 433 ntBASIC7.3□□□□□ -1.24
CiitaP79621 Gm43383-201ENSMUST00000195981 469 ntBASIC7.3□□□□□ -1.24
CiitaP79621 Gm19088-201ENSMUST00000198800 566 ntBASIC7.3□□□□□ -1.24
CiitaP79621 Gm36448-201ENSMUST00000199916 438 ntBASIC7.3□□□□□ -1.24
CiitaP79621 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC7.3□□□□□ -1.24
CiitaP79621 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC7.3□□□□□ -1.24
CiitaP79621 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC7.3□□□□□ -1.24
CiitaP79621 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC7.3□□□□□ -1.24
CiitaP79621 Gm5080-201ENSMUST00000220341 743 ntBASIC7.3□□□□□ -1.24
CiitaP79621 Gm8607-201ENSMUST00000221864 431 ntBASIC7.3□□□□□ -1.24
CiitaP79621 AC107663.1-201ENSMUST00000224257 468 ntBASIC7.3□□□□□ -1.24
CiitaP79621 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CiitaP79621 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CiitaP79621 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CiitaP79621 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CiitaP79621 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CiitaP79621 Pramel-201ENSMUST00000118979 1383 ntBASIC7.3□□□□□ -1.24
CiitaP79621 Gm15930-201ENSMUST00000156603 2037 ntBASIC7.3□□□□□ -1.24
CiitaP79621 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CiitaP79621 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC7.3□□□□□ -1.24
CiitaP79621 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CiitaP79621 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC7.3□□□□□ -1.24
CiitaP79621 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CiitaP79621 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.3□□□□□ -1.24
CiitaP79621 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.3□□□□□ -1.24
CiitaP79621 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.3□□□□□ -1.24
CiitaP79621 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.3□□□□□ -1.24
CiitaP79621 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.3□□□□□ -1.24
CiitaP79621 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.3□□□□□ -1.24
CiitaP79621 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CiitaP79621 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC7.29□□□□□ -1.24
CiitaP79621 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
CiitaP79621 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CiitaP79621 Gm8722-201ENSMUST00000121466 769 ntBASIC7.29□□□□□ -1.24
CiitaP79621 Gm23426-201ENSMUST00000122483 318 ntBASIC7.29□□□□□ -1.24
CiitaP79621 Gm14747-201ENSMUST00000149888 984 ntBASIC7.29□□□□□ -1.24
CiitaP79621 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Gm6061-201ENSMUST00000175860 492 ntBASIC7.29□□□□□ -1.24
CiitaP79621 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC7.29□□□□□ -1.24
CiitaP79621 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
CiitaP79621 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
CiitaP79621 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC7.29□□□□□ -1.24
CiitaP79621 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC7.29□□□□□ -1.24
CiitaP79621 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.29□□□□□ -1.24
CiitaP79621 AC099760.1-201ENSMUST00000196300 153 ntBASIC7.29□□□□□ -1.24
CiitaP79621 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Gm5324-201ENSMUST00000208115 476 ntBASIC7.29□□□□□ -1.24
CiitaP79621 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC7.29□□□□□ -1.24
CiitaP79621 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Gm18620-201ENSMUST00000222295 324 ntBASIC7.29□□□□□ -1.24
CiitaP79621 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC7.29□□□□□ -1.24
CiitaP79621 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
CiitaP79621 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CiitaP79621 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CiitaP79621 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CiitaP79621 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC7.29□□□□□ -1.24
CiitaP79621 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.29□□□□□ -1.24
CiitaP79621 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CiitaP79621 Gm21036-201ENSMUST00000207544 2611 ntBASIC7.29□□□□□ -1.24
CiitaP79621 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
CiitaP79621 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CiitaP79621 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CiitaP79621 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CiitaP79621 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CiitaP79621 Gm10773-201ENSMUST00000218071 3935 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CiitaP79621 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC7.28□□□□□ -1.24
CiitaP79621 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CiitaP79621 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms