Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm36935-201ENSMUST00000192526 292 ntBASIC7.79□□□□□ -1.16
Hmgb1P63158 Gm36999-201ENSMUST00000192756 1046 ntBASIC7.79□□□□□ -1.16
Hmgb1P63158 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC7.79□□□□□ -1.16
Hmgb1P63158 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Hmgb1P63158 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Hmgb1P63158 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC7.79□□□□□ -1.16
Hmgb1P63158 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hmgb1P63158 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Hmgb1P63158 Gm36758-201ENSMUST00000222594 310 ntBASIC7.79□□□□□ -1.16
Hmgb1P63158 AC146596.1-201ENSMUST00000223507 223 ntBASIC7.79□□□□□ -1.16
Hmgb1P63158 AC159188.3-201ENSMUST00000224199 880 ntBASIC7.79□□□□□ -1.16
Hmgb1P63158 AC139569.1-201ENSMUST00000226080 614 ntBASIC7.79□□□□□ -1.16
Hmgb1P63158 AC139294.2-201ENSMUST00000227159 285 ntBASIC7.79□□□□□ -1.16
Hmgb1P63158 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hmgb1P63158 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Hmgb1P63158 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Hmgb1P63158 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hmgb1P63158 Gm20900-201ENSMUST00000078729 472 ntBASIC7.79□□□□□ -1.16
Hmgb1P63158 Gm23407-201ENSMUST00000082538 91 ntBASIC7.79□□□□□ -1.16
Hmgb1P63158 Gm22504-201ENSMUST00000082963 139 ntBASIC7.79□□□□□ -1.16
Hmgb1P63158 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hmgb1P63158 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Hmgb1P63158 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Hmgb1P63158 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC7.79□□□□□ -1.16
Hmgb1P63158 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Hmgb1P63158 Gm18830-201ENSMUST00000199036 1396 ntBASIC7.79□□□□□ -1.16
Hmgb1P63158 Gm45885-202ENSMUST00000211520 1383 ntBASIC7.79□□□□□ -1.16
Hmgb1P63158 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Hmgb1P63158 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Hmgb1P63158 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Hmgb1P63158 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Hmgb1P63158 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hmgb1P63158 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.79□□□□□ -1.16
Hmgb1P63158 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Hmgb1P63158 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hmgb1P63158 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hmgb1P63158 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Hmgb1P63158 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hmgb1P63158 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hmgb1P63158 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.78□□□□□ -1.16
Hmgb1P63158 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Hmgb1P63158 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Hmgb1P63158 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC7.78□□□□□ -1.16
Hmgb1P63158 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm37914-201ENSMUST00000195317 2679 ntBASIC7.78□□□□□ -1.16
Hmgb1P63158 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hmgb1P63158 AC122769.1-201ENSMUST00000226930 1714 ntBASIC7.78□□□□□ -1.16
Hmgb1P63158 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hmgb1P63158 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Hmgb1P63158 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Hmgb1P63158 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hmgb1P63158 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Hmgb1P63158 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm11781-201ENSMUST00000118328 472 ntBASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm14769-201ENSMUST00000118590 432 ntBASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm12219-201ENSMUST00000119198 443 ntBASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm13163-201ENSMUST00000119875 336 ntBASIC7.78□□□□□ -1.16
Hmgb1P63158 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC7.78□□□□□ -1.16
Hmgb1P63158 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm22206-201ENSMUST00000158612 116 ntBASIC7.78□□□□□ -1.16
Hmgb1P63158 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm5147-201ENSMUST00000185999 794 ntBASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm42580-201ENSMUST00000197223 753 ntBASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm43656-201ENSMUST00000197882 434 ntBASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm5995-201ENSMUST00000204107 1273 ntBASIC7.78□□□□□ -1.16
Hmgb1P63158 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm45701-201ENSMUST00000212049 235 ntBASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC7.78□□□□□ -1.16
Hmgb1P63158 AC123944.2-201ENSMUST00000215290 382 ntBASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm5119-201ENSMUST00000215858 634 ntBASIC7.78□□□□□ -1.16
Hmgb1P63158 AC157571.1-201ENSMUST00000222014 520 ntBASIC7.78□□□□□ -1.16
Hmgb1P63158 AC163660.1-201ENSMUST00000223696 818 ntBASIC7.78□□□□□ -1.16
Hmgb1P63158 AC117949.1-201ENSMUST00000225547 419 ntBASIC7.78□□□□□ -1.16
Hmgb1P63158 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Hmgb1P63158 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.78□□□□□ -1.16
Hmgb1P63158 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Hmgb1P63158 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Hmgb1P63158 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm43019-201ENSMUST00000196948 2863 ntBASIC7.78□□□□□ -1.16
Hmgb1P63158 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Hmgb1P63158 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Hmgb1P63158 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Hmgb1P63158 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hmgb1P63158 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Hmgb1P63158 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Hmgb1P63158 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hmgb1P63158 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Hmgb1P63158 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC7.78□□□□□ -1.16
Hmgb1P63158 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hmgb1P63158 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Hmgb1P63158 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
Hmgb1P63158 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC7.77□□□□□ -1.16
Hmgb1P63158 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
Hmgb1P63158 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms