Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Lsamp-202ENSMUST00000099761 8794 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Brca1P48754 CT009757.6-201ENSMUST00000220661 2312 ntBASIC7.46□□□□□ -1.22
Brca1P48754 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Brca1P48754 Gm13416-201ENSMUST00000117264 1612 ntBASIC7.45□□□□□ -1.22
Brca1P48754 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Gm15901-201ENSMUST00000117663 941 ntBASIC7.45□□□□□ -1.22
Brca1P48754 Gm15781-201ENSMUST00000120216 323 ntBASIC7.45□□□□□ -1.22
Brca1P48754 Gm12229-201ENSMUST00000120487 468 ntBASIC7.45□□□□□ -1.22
Brca1P48754 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC7.45□□□□□ -1.22
Brca1P48754 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC7.45□□□□□ -1.22
Brca1P48754 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC7.45□□□□□ -1.22
Brca1P48754 Gm8419-201ENSMUST00000189886 412 ntBASIC7.45□□□□□ -1.22
Brca1P48754 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Gm4332-201ENSMUST00000196114 346 ntBASIC7.45□□□□□ -1.22
Brca1P48754 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Brca1P48754 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Brca1P48754 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC7.45□□□□□ -1.22
Brca1P48754 Gm44265-201ENSMUST00000203631 465 ntBASIC7.45□□□□□ -1.22
Brca1P48754 Gm19033-201ENSMUST00000208516 964 ntBASIC7.45□□□□□ -1.22
Brca1P48754 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC7.45□□□□□ -1.22
Brca1P48754 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC7.45□□□□□ -1.22
Brca1P48754 AC172989.1-201ENSMUST00000226387 513 ntBASIC7.45□□□□□ -1.22
Brca1P48754 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC7.45□□□□□ -1.22
Brca1P48754 Gm28112-201ENSMUST00000190898 1875 ntBASIC7.45□□□□□ -1.22
Brca1P48754 Gm37783-201ENSMUST00000192025 1856 ntBASIC7.45□□□□□ -1.22
Brca1P48754 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Brca1P48754 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Brca1P48754 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC7.45□□□□□ -1.22
Brca1P48754 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
Brca1P48754 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Brca1P48754 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Brca1P48754 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Gm12388-201ENSMUST00000119112 1887 ntBASIC7.45□□□□□ -1.22
Brca1P48754 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Grk1-202ENSMUST00000209909 7431 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Brca1P48754 Grk1-201ENSMUST00000033827 7425 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Gm12919-201ENSMUST00000119855 1594 ntBASIC7.45□□□□□ -1.22
Brca1P48754 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Gm11622-201ENSMUST00000120525 691 ntBASIC7.45□□□□□ -1.22
Brca1P48754 Gm2959-201ENSMUST00000169844 621 ntBASIC7.45□□□□□ -1.22
Brca1P48754 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC7.45□□□□□ -1.22
Brca1P48754 Mir3090-201ENSMUST00000175597 87 ntBASIC7.45□□□□□ -1.22
Brca1P48754 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC7.45□□□□□ -1.22
Brca1P48754 Gm27219-201ENSMUST00000184633 742 ntBASIC7.45□□□□□ -1.22
Brca1P48754 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC7.45□□□□□ -1.22
Brca1P48754 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC7.45□□□□□ -1.22
Brca1P48754 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC7.45□□□□□ -1.22
Brca1P48754 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC7.45□□□□□ -1.22
Brca1P48754 Olfr923-204ENSMUST00000219798 1068 ntBASIC7.45□□□□□ -1.22
Brca1P48754 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Brca1P48754 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Pogz-204ENSMUST00000107269 5966 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Brca1P48754 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.45□□□□□ -1.22
Brca1P48754 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC7.45□□□□□ -1.22
Brca1P48754 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Brca1P48754 Opcml-202ENSMUST00000115243 6676 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 Gm5949-201ENSMUST00000213468 1421 ntBASIC7.44□□□□□ -1.22
Brca1P48754 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Brca1P48754 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Brca1P48754 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
Brca1P48754 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC7.44□□□□□ -1.22
Brca1P48754 Gm23408-201ENSMUST00000158523 265 ntBASIC7.44□□□□□ -1.22
Brca1P48754 Gm4617-201ENSMUST00000178993 331 ntBASIC7.44□□□□□ -1.22
Brca1P48754 Gm6119-201ENSMUST00000193443 1206 ntBASIC7.44□□□□□ -1.22
Brca1P48754 Gm44361-201ENSMUST00000197960 94 ntBASIC7.44□□□□□ -1.22
Brca1P48754 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
Brca1P48754 AC161586.1-201ENSMUST00000223232 547 ntBASIC7.44□□□□□ -1.22
Brca1P48754 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC7.44□□□□□ -1.22
Brca1P48754 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms