Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm25179-201ENSMUST00000122632 128 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Gm22024-201ENSMUST00000122733 287 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Gm2735-201ENSMUST00000136133 277 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC8.55□□□□□ -1.04
Rfx1P48377 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC8.55□□□□□ -1.04
Rfx1P48377 Gm26407-201ENSMUST00000158504 307 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Gm24551-201ENSMUST00000158645 92 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Gm17129-201ENSMUST00000168168 505 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 Gm21182-201ENSMUST00000178899 794 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Gm8529-201ENSMUST00000183298 745 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC8.55□□□□□ -1.04
Rfx1P48377 Gm38334-201ENSMUST00000195060 313 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Gm18765-201ENSMUST00000203166 660 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC8.55□□□□□ -1.04
Rfx1P48377 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC8.55□□□□□ -1.04
Rfx1P48377 AC126554.3-201ENSMUST00000223131 493 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 AC146596.1-201ENSMUST00000223507 223 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 CT030662.3-201ENSMUST00000228751 476 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 Gm6863-201ENSMUST00000052882 636 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC8.55□□□□□ -1.04
Rfx1P48377 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Rfx1P48377 Olfr878-201ENSMUST00000086061 1065 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Rfx1P48377 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Rfx1P48377 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC8.55□□□□□ -1.04
Rfx1P48377 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Rfx1P48377 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Rfx1P48377 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Rfx1P48377 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rfx1P48377 AC126549.1-201ENSMUST00000225044 3687 ntBASIC8.55□□□□□ -1.04
Rfx1P48377 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rfx1P48377 Gm10855-201ENSMUST00000100426 2541 ntBASIC8.54□□□□□ -1.04
Rfx1P48377 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Rfx1P48377 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC8.54□□□□□ -1.04
Rfx1P48377 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC8.54□□□□□ -1.04
Rfx1P48377 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rfx1P48377 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC8.54□□□□□ -1.04
Rfx1P48377 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rfx1P48377 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rfx1P48377 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Rfx1P48377 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rfx1P48377 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rfx1P48377 Gm12124-201ENSMUST00000120504 679 ntBASIC8.54□□□□□ -1.04
Rfx1P48377 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rfx1P48377 Gm22949-201ENSMUST00000158562 105 ntBASIC8.54□□□□□ -1.04
Rfx1P48377 Gm8550-201ENSMUST00000161621 653 ntBASIC8.54□□□□□ -1.04
Rfx1P48377 Gm18560-201ENSMUST00000173463 1123 ntBASIC8.54□□□□□ -1.04
Rfx1P48377 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Rfx1P48377 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC8.54□□□□□ -1.04
Rfx1P48377 Gm25692-201ENSMUST00000175444 125 ntBASIC8.54□□□□□ -1.04
Rfx1P48377 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC8.54□□□□□ -1.04
Rfx1P48377 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Rfx1P48377 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC8.54□□□□□ -1.04
Rfx1P48377 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rfx1P48377 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC8.54□□□□□ -1.04
Rfx1P48377 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC8.54□□□□□ -1.04
Rfx1P48377 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC8.54□□□□□ -1.04
Rfx1P48377 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rfx1P48377 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rfx1P48377 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC8.54□□□□□ -1.04
Rfx1P48377 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC8.54□□□□□ -1.04
Rfx1P48377 Gm44192-201ENSMUST00000204195 556 ntBASIC8.54□□□□□ -1.04
Rfx1P48377 Gm44128-201ENSMUST00000204909 219 ntBASIC8.54□□□□□ -1.04
Rfx1P48377 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rfx1P48377 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rfx1P48377 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC8.54□□□□□ -1.04
Rfx1P48377 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC8.54□□□□□ -1.04
Rfx1P48377 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC8.54□□□□□ -1.04
Rfx1P48377 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC8.54□□□□□ -1.04
Rfx1P48377 AC159205.2-201ENSMUST00000223759 816 ntBASIC8.54□□□□□ -1.04
Rfx1P48377 AC154245.1-201ENSMUST00000224615 601 ntBASIC8.54□□□□□ -1.04
Rfx1P48377 AC154484.1-201ENSMUST00000227311 771 ntBASIC8.54□□□□□ -1.04
Rfx1P48377 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Rfx1P48377 Gm5250-201ENSMUST00000059065 321 ntBASIC8.54□□□□□ -1.04
Rfx1P48377 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Rfx1P48377 Gm6807-201ENSMUST00000077435 888 ntBASIC8.54□□□□□ -1.04
Rfx1P48377 Gm25131-201ENSMUST00000082653 151 ntBASIC8.54□□□□□ -1.04
Rfx1P48377 Mir135b-201ENSMUST00000083501 97 ntBASIC8.54□□□□□ -1.04
Rfx1P48377 Gm24924-201ENSMUST00000084007 164 ntBASIC8.54□□□□□ -1.04
Rfx1P48377 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Rfx1P48377 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Rfx1P48377 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Rfx1P48377 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms