Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm44471-201ENSMUST00000197963 100 ntBASIC6.68□□□□□ -1.34
Hoxc11P31313 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Hoxc11P31313 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.68□□□□□ -1.34
Hoxc11P31313 Gm4860-201ENSMUST00000200368 454 ntBASIC6.68□□□□□ -1.34
Hoxc11P31313 Gm43895-201ENSMUST00000203219 855 ntBASIC6.68□□□□□ -1.34
Hoxc11P31313 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC6.68□□□□□ -1.34
Hoxc11P31313 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.68□□□□□ -1.34
Hoxc11P31313 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.68□□□□□ -1.34
Hoxc11P31313 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Hoxc11P31313 Mir296-201ENSMUST00000083587 79 ntBASIC6.68□□□□□ -1.34
Hoxc11P31313 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxc11P31313 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
Hoxc11P31313 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Hoxc11P31313 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxc11P31313 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxc11P31313 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.68□□□□□ -1.34
Hoxc11P31313 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxc11P31313 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.68□□□□□ -1.34
Hoxc11P31313 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxc11P31313 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxc11P31313 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.68□□□□□ -1.34
Hoxc11P31313 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxc11P31313 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.68□□□□□ -1.34
Hoxc11P31313 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Hoxc11P31313 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Hoxc11P31313 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.68□□□□□ -1.34
Hoxc11P31313 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxc11P31313 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxc11P31313 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm9874-202ENSMUST00000194957 1464 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm14912-201ENSMUST00000120166 1773 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxc11P31313 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxc11P31313 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxc11P31313 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxc11P31313 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm22256-201ENSMUST00000102291 107 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm12468-201ENSMUST00000116189 404 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm13137-201ENSMUST00000118035 345 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm14847-201ENSMUST00000121978 519 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm23657-201ENSMUST00000122623 294 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.67□□□□□ -1.34
Hoxc11P31313 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxc11P31313 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm7289-201ENSMUST00000168993 734 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm4373-201ENSMUST00000178571 556 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm7867-201ENSMUST00000189856 546 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm37689-201ENSMUST00000193139 275 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.67□□□□□ -1.34
Hoxc11P31313 AC147615.1-201ENSMUST00000218914 441 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 AC161374.1-201ENSMUST00000224191 794 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxc11P31313 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxc11P31313 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxc11P31313 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Hoxc11P31313 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm42820-201ENSMUST00000200084 3063 ntBASIC6.67□□□□□ -1.34
Hoxc11P31313 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxc11P31313 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxc11P31313 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Hoxc11P31313 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC6.66□□□□□ -1.34
Hoxc11P31313 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxc11P31313 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxc11P31313 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxc11P31313 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxc11P31313 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxc11P31313 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxc11P31313 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxc11P31313 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxc11P31313 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxc11P31313 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms