Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm35323-201ENSMUST00000191836 499 ntBASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Ighv5-5-201ENSMUST00000193826 329 ntBASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Gm30646-201ENSMUST00000207662 180 ntBASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 AC108846.4-201ENSMUST00000216783 341 ntBASIC7.23□□□□□ -1.25
Chmp6P0C0A3 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 AC102676.1-201ENSMUST00000228131 719 ntBASIC7.23□□□□□ -1.25
Chmp6P0C0A3 AC132833.4-201ENSMUST00000228313 203 ntBASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.23□□□□□ -1.25
Chmp6P0C0A3 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Gm6494-201ENSMUST00000218604 2298 ntBASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Gm19368-201ENSMUST00000221258 4424 ntBASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Chmp6P0C0A3 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Gm37595-201ENSMUST00000192668 1742 ntBASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Gm5601-201ENSMUST00000118909 972 ntBASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Gm15349-201ENSMUST00000121154 204 ntBASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Gm4886-201ENSMUST00000121874 1176 ntBASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Gm10364-202ENSMUST00000153034 1001 ntBASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Gm22523-201ENSMUST00000158696 100 ntBASIC7.22□□□□□ -1.25
Chmp6P0C0A3 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Gm17950-201ENSMUST00000214617 646 ntBASIC7.22□□□□□ -1.25
Chmp6P0C0A3 AC124510.2-201ENSMUST00000221958 683 ntBASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.22□□□□□ -1.25
Chmp6P0C0A3 AC125117.2-201ENSMUST00000228344 1140 ntBASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Gm15500-201ENSMUST00000071523 894 ntBASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Gm25587-201ENSMUST00000082498 166 ntBASIC7.22□□□□□ -1.25
Chmp6P0C0A3 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Gm20749-201ENSMUST00000186319 3492 ntBASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Chmp6P0C0A3 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Chmp6P0C0A3 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Chmp6P0C0A3 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Chmp6P0C0A3 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.25
Chmp6P0C0A3 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Chmp6P0C0A3 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Chmp6P0C0A3 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Chmp6P0C0A3 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Chmp6P0C0A3 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gm16073-201ENSMUST00000116032 517 ntBASIC7.21□□□□□ -1.26
Chmp6P0C0A3 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gm25717-201ENSMUST00000158631 353 ntBASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gm16297-201ENSMUST00000161466 459 ntBASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gm7289-201ENSMUST00000168993 734 ntBASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gm23810-201ENSMUST00000175150 74 ntBASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gm37637-201ENSMUST00000195540 1256 ntBASIC7.21□□□□□ -1.26
Chmp6P0C0A3 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gm5711-201ENSMUST00000197896 421 ntBASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gm4751-201ENSMUST00000200620 1105 ntBASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gm8479-201ENSMUST00000203825 718 ntBASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gm18012-201ENSMUST00000204558 773 ntBASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gm44823-201ENSMUST00000204775 1107 ntBASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms