Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm14747-201ENSMUST00000149888 984 ntBASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm25660-201ENSMUST00000158470 104 ntBASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Esd-ps-201ENSMUST00000170684 847 ntBASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm20530-201ENSMUST00000174261 254 ntBASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm27158-201ENSMUST00000183813 238 ntBASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm27299-201ENSMUST00000184593 103 ntBASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm37189-201ENSMUST00000192131 298 ntBASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.72□□□□□ -1.33
Srp54bE9PXC0 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm25587-201ENSMUST00000082498 166 ntBASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm9575-201ENSMUST00000122140 1339 ntBASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Srp54bE9PXC0 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Srp54bE9PXC0 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.71□□□□□ -1.33
Srp54bE9PXC0 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Srp54bE9PXC0 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.71□□□□□ -1.33
Srp54bE9PXC0 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Srp54bE9PXC0 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Srp54bE9PXC0 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Gm23748-201ENSMUST00000104227 131 ntBASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Gm11987-201ENSMUST00000118524 381 ntBASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Gm12135-201ENSMUST00000119170 466 ntBASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Gm23740-201ENSMUST00000157385 100 ntBASIC6.71□□□□□ -1.34
Srp54bE9PXC0 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Mir7046-201ENSMUST00000183435 66 ntBASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Gm6077-201ENSMUST00000196008 499 ntBASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Gm8190-201ENSMUST00000199603 586 ntBASIC6.71□□□□□ -1.34
Srp54bE9PXC0 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 AL713985.1-201ENSMUST00000219030 420 ntBASIC6.71□□□□□ -1.34
Srp54bE9PXC0 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.71□□□□□ -1.34
Srp54bE9PXC0 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.71□□□□□ -1.34
Srp54bE9PXC0 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Gm43128-201ENSMUST00000202212 1621 ntBASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Gm44121-201ENSMUST00000205169 2006 ntBASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.71□□□□□ -1.34
Srp54bE9PXC0 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Srp54bE9PXC0 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Srp54bE9PXC0 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.7□□□□□ -1.34
Srp54bE9PXC0 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms