Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 AC022682.2-202ENSMUST00000224394 3943 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm13137-201ENSMUST00000118035 345 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm13754-201ENSMUST00000120486 998 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm2709-201ENSMUST00000142979 350 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm25969-201ENSMUST00000157166 132 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm25433-201ENSMUST00000158283 286 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm9167-201ENSMUST00000182469 962 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm5345-201ENSMUST00000183076 1014 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm28443-201ENSMUST00000189081 698 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm28413-201ENSMUST00000189369 291 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Vmn1r41-202ENSMUST00000226337 888 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 AC154324.1-201ENSMUST00000226711 814 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm3883-201ENSMUST00000098119 3229 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Gm18248-201ENSMUST00000191164 1846 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Usf3B2RUQ2 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm45876-201ENSMUST00000212698 2709 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm26067-201ENSMUST00000103789 110 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm25785-201ENSMUST00000104129 125 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm25724-201ENSMUST00000104531 117 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm14158-201ENSMUST00000118409 308 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm14741-201ENSMUST00000120777 1009 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm3810-201ENSMUST00000122413 476 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm26410-201ENSMUST00000157670 261 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm17137-202ENSMUST00000165729 957 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm20401-201ENSMUST00000173717 212 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Mir7211-201ENSMUST00000184071 63 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm27210-201ENSMUST00000184263 402 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm19088-201ENSMUST00000198800 566 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm18012-201ENSMUST00000204558 773 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 AC140288.1-201ENSMUST00000226329 503 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 AC137871.3-201ENSMUST00000226628 225 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 AC165080.3-201ENSMUST00000217162 3116 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm15930-201ENSMUST00000156603 2037 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 AC152922.2-201ENSMUST00000213353 3879 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm9030-201ENSMUST00000218405 2410 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm9029-201ENSMUST00000219232 2410 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Gm10855-201ENSMUST00000100426 2541 ntBASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Usf3B2RUQ2 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Usf3B2RUQ2 Gm22267-201ENSMUST00000104008 131 ntBASIC5.59□□□□□ -1.52
Usf3B2RUQ2 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Usf3B2RUQ2 Gm15310-201ENSMUST00000117891 372 ntBASIC5.59□□□□□ -1.52
Usf3B2RUQ2 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Usf3B2RUQ2 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Usf3B2RUQ2 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC5.59□□□□□ -1.52
Usf3B2RUQ2 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.59□□□□□ -1.52
Usf3B2RUQ2 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
Usf3B2RUQ2 CT025579.4-201ENSMUST00000224598 627 ntBASIC5.59□□□□□ -1.52
Usf3B2RUQ2 AC154640.1-202ENSMUST00000227828 496 ntBASIC5.59□□□□□ -1.52
Usf3B2RUQ2 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Usf3B2RUQ2 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC5.59□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms