Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Gm37169-201ENSMUST00000195599 4161 ntBASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Gm17137-202ENSMUST00000165729 957 ntBASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Gm37376-201ENSMUST00000192176 453 ntBASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 AC135353.1-201ENSMUST00000215330 630 ntBASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Gm21036-201ENSMUST00000207544 2611 ntBASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Mir680-1-201ENSMUST00000102257 109 ntBASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Gm15901-201ENSMUST00000117663 941 ntBASIC7.37□□□□□ -1.23
Scn3aA2ASI5 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Gm12890-201ENSMUST00000120885 373 ntBASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Calr-ps-201ENSMUST00000121776 485 ntBASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Gm19840-201ENSMUST00000169624 882 ntBASIC7.37□□□□□ -1.23
Scn3aA2ASI5 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Gm17824-201ENSMUST00000197690 805 ntBASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Gm18805-201ENSMUST00000206872 655 ntBASIC7.37□□□□□ -1.23
Scn3aA2ASI5 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Scn3aA2ASI5 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC7.36□□□□□ -1.23
Scn3aA2ASI5 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Scn3aA2ASI5 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Scn3aA2ASI5 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.36□□□□□ -1.23
Scn3aA2ASI5 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Scn3aA2ASI5 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Scn3aA2ASI5 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Scn3aA2ASI5 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Scn3aA2ASI5 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC7.36□□□□□ -1.23
Scn3aA2ASI5 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC7.36□□□□□ -1.23
Scn3aA2ASI5 Gm18716-201ENSMUST00000204507 1603 ntBASIC7.36□□□□□ -1.23
Scn3aA2ASI5 Gm16511-201ENSMUST00000120019 564 ntBASIC7.36□□□□□ -1.23
Scn3aA2ASI5 Gm15967-201ENSMUST00000120027 1116 ntBASIC7.36□□□□□ -1.23
Scn3aA2ASI5 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Scn3aA2ASI5 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC7.36□□□□□ -1.23
Scn3aA2ASI5 Gm43850-201ENSMUST00000202021 578 ntBASIC7.36□□□□□ -1.23
Scn3aA2ASI5 CT009556.1-201ENSMUST00000227282 449 ntBASIC7.36□□□□□ -1.23
Scn3aA2ASI5 Gm9788-201ENSMUST00000057038 906 ntBASIC7.36□□□□□ -1.23
Scn3aA2ASI5 Gm37310-201ENSMUST00000195237 2968 ntBASIC7.36□□□□□ -1.23
Scn3aA2ASI5 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
Scn3aA2ASI5 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Scn3aA2ASI5 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Scn3aA2ASI5 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Gm22103-201ENSMUST00000116733 121 ntBASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Gm26475-201ENSMUST00000116769 121 ntBASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Gm23620-201ENSMUST00000116812 121 ntBASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Gm25042-201ENSMUST00000116856 121 ntBASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Gm25540-201ENSMUST00000116880 121 ntBASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Gm12400-201ENSMUST00000120915 1003 ntBASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Gm23550-201ENSMUST00000179003 121 ntBASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Gm25123-201ENSMUST00000179154 121 ntBASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Gm25353-201ENSMUST00000179366 121 ntBASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Gm22992-201ENSMUST00000179496 121 ntBASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Gm25892-201ENSMUST00000179867 121 ntBASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Gm24092-201ENSMUST00000180257 121 ntBASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Gm7952-201ENSMUST00000180540 984 ntBASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Gm28665-201ENSMUST00000189269 670 ntBASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Scn3aA2ASI5 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Gm8454-201ENSMUST00000196980 811 ntBASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Gm7663-201ENSMUST00000201151 1240 ntBASIC7.35□□□□□ -1.23
Scn3aA2ASI5 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Scn3aA2ASI5 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms